RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 SND1Q7KZF4 910 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDR1-224ENST00000376567 CERS3Q8IU89 383 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 BPIFA3Q9BQP9 254 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 NDST4Q9H3R1 872 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.71□□□□□ -0.21
DDR1-224ENST00000376567 CCPG1Q9ULG6 757 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 ZBTB5O15062 677 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 ATP2C2O75185 946 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 GUCY2FP51841 1108 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 CKAP4Q07065 602 aaKnown RBP13.71□□□□□ -0.21
DDR1-224ENST00000376567 ZNF384Q8TF68 577 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 TRIM9Q9C026 710 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
DDR1-224ENST00000376567 GINS2Q9Y248 185 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 CNTNAP4Q9C0A0 1308 aa13.71□□□□□ -0.21
DDR1-224ENST00000376567 EIF2AK2P19525 551 aaKnown RBP13.71□□□□□ -0.22
DDR1-224ENST00000376567 SBK1Q52WX2 424 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 ODR4Q5SWX8 454 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 U2AF1L4Q8WU68 220 aaKnown RBP13.71□□□□□ -0.22
DDR1-224ENST00000376567 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 CDC23Q9UJX2 597 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 ANAPC4Q9UJX5 808 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 RGPD5Q99666 1765 aa13.71□□□□□ -0.22
DDR1-224ENST00000376567 XRCC5P13010 732 aaKnown RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 TTC19Q6DKK2 380 aaPredicted RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 FAM178BQ8IXR5 827 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 TBC1D5Q92609 795 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 CNKSR1Q969H4 720 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 CCDC17Q96LX7 622 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 PDE11AQ9HCR9 933 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 DDX4Q9NQI0 724 aaKnown RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 EFCAB8A8MWE9 144 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 PPP1R3GB7ZBB8 358 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 RPL13P26373 211 aaKnown RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 PMS1P54277 932 aaKnown RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 STXBP4Q6ZWJ1 553 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 KSR1Q8IVT5 923 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 NAA15Q9BXJ9 866 aaKnown RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
DDR1-224ENST00000376567 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 DDR1Q08345 913 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 C2orf54Q08AI8 447 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
DDR1-224ENST00000376567 MYMKA6NI61 221 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 GYPCP04921 128 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 SYDE2Q5VT97 1194 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 EEPD1Q7L9B9 569 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 CCDC25Q86WR0 208 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 COL23A1Q86Y22 540 aaPredicted RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 SMARCAL1Q9NZC9 954 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 TUBB4AP04350 444 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 KRT5P13647 590 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 ARHGAP4P98171 946 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 C8orf74Q6P047 294 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 DNAAF5Q86Y56 855 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 DHTKD1Q96HY7 919 aaPredicted RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 NUP58Q9BVL2 599 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 PACSIN2Q9UNF0 486 aaPredicted RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 NCK2O43639 380 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 BIRC3Q13489 604 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 NR1I3Q14994 352 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 AK8Q96MA6 479 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
DDR1-224ENST00000376567 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
DDR1-224ENST00000376567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDR1-224ENST00000376567 GPR75-ASB3A0A0A6YYF3 556 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 RXRBP28702 533 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 PROCA1Q8NCQ7 364 aaPredicted RBP13.68□□□□□ -0.22
DDR1-224ENST00000376567 JMJD4Q9H9V9 463 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 KCNK3O14649 394 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
DDR1-224ENST00000376567 STAT2P52630 851 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 FAM102BQ5T8I3 360 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 SRGAP1Q7Z6B7 1085 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
DDR1-224ENST00000376567 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 HAUS4Q9H6D7 363 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 SWAP70Q9UH65 585 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 HYOU1Q9Y4L1 999 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 GOLGA8IPA6NC78 632 aa13.68□□□□□ -0.22
DDR1-224ENST00000376567 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms