RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SELPP16109 830 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 HAND2P61296 217 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 SEPT14Q6ZU15 432 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 CHST3Q7LGC8 479 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 SESTD1Q86VW0 696 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 FAM227BQ96M60 508 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 ZBED2Q9BTP6 218 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 HELLSQ9NRZ9 838 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 TCP11L1Q9NUJ3 509 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 COL20A1Q9P218 1284 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 PTPRSQ13332 1948 aa15.38■□□□□ 0.05
CLCN6-205ENST00000376492 A0A0D9SFI3 127 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 CKBP12277 381 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 ALX1Q15699 326 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 FAM117BQ6P1L5 589 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 CNKSR3Q6P9H4 555 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 TBC1D5Q92609 795 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 SUGCTQ9HAC7 445 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 PNMA2Q9UL42 364 aa15.37■□□□□ 0.05
CLCN6-205ENST00000376492 LINC01553A4QN01 128 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 GPR37L1O60883 481 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 GJB5O95377 273 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 GH1P01241 217 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 CXCL10P02778 98 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 TBC1D10CQ8IV04 446 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 SYTL5Q8TDW5 730 aaPredicted RBP15.36■□□□□ 0.05
CLCN6-205ENST00000376492 WNT8BQ93098 351 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 TAAR1Q96RJ0 339 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 UBA5Q9GZZ9 404 aa15.36■□□□□ 0.05
CLCN6-205ENST00000376492 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
CLCN6-205ENST00000376492 BRWD1Q9NSI6 2320 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 ZNF286BP0CG31 522 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 SDSP20132 328 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 RBL2Q08999 1139 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 MBTPS1Q14703 1052 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 CDC37Q16543 378 aaPredicted RBP15.35■□□□□ 0.05
CLCN6-205ENST00000376492 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 TRAF7Q6Q0C0 670 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
CLCN6-205ENST00000376492 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 TGS1Q96RS0 853 aaKnown RBP15.35■□□□□ 0.05
CLCN6-205ENST00000376492 ZKSCAN3Q9BRR0 538 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 UBE2ZQ9H832 354 aaPredicted RBP15.35■□□□□ 0.05
CLCN6-205ENST00000376492 HDAC6Q9UBN7 1215 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 GTF2IRD1Q9UHL9 959 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 NEDD4P46934 1319 aa15.35■□□□□ 0.05
CLCN6-205ENST00000376492 B4DLN1 442 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 HSPD1P10809 573 aaKnown RBP15.34■□□□□ 0.05
CLCN6-205ENST00000376492 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
CLCN6-205ENST00000376492 KCNA5P22460 613 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 MRPL12P52815 198 aaKnown RBP15.34■□□□□ 0.05
CLCN6-205ENST00000376492 ERVK-21P61565 698 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 ZNF200P98182 395 aaPredicted RBP15.34■□□□□ 0.05
CLCN6-205ENST00000376492 C7orf31Q8N865 590 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 RGS22Q8NE09 1264 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 RAD9AQ99638 391 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 ALG1Q9BT22 464 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 LMCD1Q9NZU5 365 aa15.34■□□□□ 0.05
CLCN6-205ENST00000376492 ABHD14A-ACY1A0A1B0GW23 586 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 PSEN2P49810 448 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.04
CLCN6-205ENST00000376492 HIC1Q14526 733 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 MFSD10Q14728 455 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 DGKDQ16760 1214 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 TRIM71Q2Q1W2 868 aaKnown RBP15.33■□□□□ 0.04
CLCN6-205ENST00000376492 ZNF618Q5T7W0 954 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 TTC22Q5TAA0 569 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.33■□□□□ 0.04
CLCN6-205ENST00000376492 CENPQQ7L2Z9 268 aaPredicted RBP15.33■□□□□ 0.04
CLCN6-205ENST00000376492 NSUN6Q8TEA1 469 aaKnown RBP15.33■□□□□ 0.04
CLCN6-205ENST00000376492 TTC14Q96N46 770 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 RMDN3Q96TC7 470 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 C17orf80Q9BSJ5 609 aa15.33■□□□□ 0.04
CLCN6-205ENST00000376492 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
CLCN6-205ENST00000376492 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.32■□□□□ 0.04
CLCN6-205ENST00000376492 HIP1O00291 1037 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 SORBS3O60504 671 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 F2P00734 622 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 IL9P15248 144 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 EIF2AK2P19525 551 aaKnown RBP15.32■□□□□ 0.04
CLCN6-205ENST00000376492 PTK7Q13308 1070 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 STXBP2Q15833 593 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 KIAA0753Q2KHM9 967 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 LEXMQ3ZCV2 418 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
CLCN6-205ENST00000376492 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.32■□□□□ 0.04
CLCN6-205ENST00000376492 ABCB11O95342 1321 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 ZMYM6O95789 1325 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 MUC6Q6W4X9 2439 aa15.32■□□□□ 0.04
CLCN6-205ENST00000376492 PIEZO1Q92508 2521 aa15.31■□□□□ 0.04
CLCN6-205ENST00000376492 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
CLCN6-205ENST00000376492 GSPT1P15170 499 aaKnown RBP15.31■□□□□ 0.04
CLCN6-205ENST00000376492 IKBKEQ14164 716 aa15.31■□□□□ 0.04
CLCN6-205ENST00000376492 FAM178BQ8IXR5 827 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms