RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ARMCX3Q9UH62 379 aaPredicted RBP7.17□□□□□ -1.26
SMC1A-202ENST00000375340 MYO1CO00159 1063 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 TRAPPC10P48553 1259 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 IQCDQ96DY2 449 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 NUCKS1Q9H1E3 243 aaKnown RBP7.17□□□□□ -1.26
SMC1A-202ENST00000375340 RICTORQ6R327 1708 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 LOC102724428A0A0B4J2F2 783 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 GDF11O95390 407 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 SIK1P57059 783 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 MAN2A1Q16706 1144 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 FAM26FQ5R3K3 315 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 FYB2Q5VWT5 728 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 EFCAB13Q8IY85 973 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 SLC44A5Q8NCS7 719 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 SUGCTQ9HAC7 445 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 WDR19Q8NEZ3 1342 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 KAZNQ674X7 775 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 TCHPQ9BT92 498 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
SMC1A-202ENST00000375340 C3P01024 1663 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 BCRP11274 1271 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 E2F5Q15329 346 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 GALNT17Q6IS24 598 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 FNBP1Q96RU3 617 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 IMPG2Q9BZV3 1241 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 CASZ1Q86V15 1759 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 LAD1O00515 517 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ATP2A1O14983 1001 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MYCNP04198 464 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 CLTAP09496 248 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ADCY8P40145 1251 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 LIN9Q5TKA1 542 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PPP1R21Q6ZMI0 780 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ZNF365Q70YC5 407 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MARCH10Q8NA82 808 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ZNF579Q8NAF0 562 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 DDX12PQ92771 950 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ARHGEF2Q92974 986 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 AFPP02771 609 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 RPSAP08865 295 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PCK1P35558 622 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 RFX5P48382 616 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 SLFN12Q8IYM2 578 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PSMD1Q99460 953 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 EIF3CLB5ME19 914 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 HDLBPQ00341 1268 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PFKFB3Q16875 520 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 IFT74Q96LB3 600 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 EIF3CQ99613 913 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 JPH2Q9BR39 696 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 NDST4Q9H3R1 872 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 TRIM66O15016 1216 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 SERPING1P05155 500 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 SMTNP53814 917 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 DPYDQ12882 1025 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 STAG2Q8N3U4 1231 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MAGEF1Q9HAY2 307 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ATP8A2Q9NTI2 1148 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PCDHA6Q9UN73 950 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PCDHA8Q9Y5H6 950 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 TNS3Q68CZ2 1445 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 TCP10L2B9ZVM9 353 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 HOXA13P31271 388 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 STAT1P42224 750 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MESDQ14696 234 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 CPXCR1Q8N123 301 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 TTC26A0AVF1 554 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 PPFIA4O75335 1185 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 NR1D1P20393 614 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 STAT3P40763 770 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ZBED6P86452 979 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MIER3Q7Z3K6 550 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 IGDCC4Q8TDY8 1250 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MMS19Q96T76 1030 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 RABGAP1Q9Y3P9 1069 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 ADAMTS13Q76LX8 1427 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 SFI1A8K8P3 1242 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 HHATQ5VTY9 493 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 TC2NQ8N9U0 490 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-202ENST00000375340 MAP3K14Q99558 947 aa7.16□□□□□ -1.26
SMC1A-202ENST00000375340 STX2P32856 288 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 CYP2C19P33261 490 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 RAD9BQ6WBX8 426 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 DNAJC17Q9NVM6 304 aaKnown RBP7.15□□□□□ -1.26
SMC1A-202ENST00000375340 JRKLQ9Y4A0 524 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 THAP12O43422 761 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 PRPF6O94906 941 aaKnown RBP7.15□□□□□ -1.26
SMC1A-202ENST00000375340 ZKSCAN8Q15776 578 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-202ENST00000375340 GKAP1Q5VSY0 366 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-202ENST00000375340 ILDR1Q86SU0 546 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-202ENST00000375340 PNKPQ96T60 521 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 CHP1Q99653 195 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 A0A1B0GTH6 734 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 CIB2O75838 187 aa7.15□□□□□ -1.26
SMC1A-202ENST00000375340 DLATP10515 647 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms