RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 CRTC1Q6UUV9 634 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 TBC1D21Q8IYX1 336 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 ATP11CQ8NB49 1132 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 CEP295NLQ96MC4 621 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 RBM14Q96PK6 669 aaKnown RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 AHCYL1O43865 530 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 ZSCAN22P10073 491 aaPredicted RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 CD86P42081 329 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 ENOSF1Q7L5Y1 443 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 RBM12BQ8IXT5 1001 aaKnown RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 PJA1Q8NG27 643 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 TATDN2Q93075 761 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 ELAC2Q9BQ52 826 aaKnown RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 OBP2AQ9NY56 170 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 GTF2IRD1Q9UHL9 959 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 P4HA2O15460 535 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 STAMBPO95630 424 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 HOXD12P35452 270 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 MRPL50Q8N5N7 158 aaKnown RBP10.03□□□□□ -0.8
UBR4-201ENST00000375218 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
UBR4-201ENST00000375218 CNDP2Q96KP4 475 aaKnown RBP10.03□□□□□ -0.8
UBR4-201ENST00000375218 CDH19Q9H159 772 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 PSD3Q9NYI0 1048 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 THSD7AQ9UPZ6 1657 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 PDIA6Q15084 440 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 TBC1D25Q3MII6 688 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 C16orf86Q6ZW13 317 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 DDX18Q9NVP1 670 aaKnown RBP10.03□□□□□ -0.8
UBR4-201ENST00000375218 LIMCH1Q9UPQ0 1083 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 SLC4A4Q9Y6R1 1079 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 ZER1Q7Z7L7 766 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 PDCL2Q8N4E4 241 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 TEX9Q8N6V9 391 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 CPDO75976 1380 aa10.03□□□□□ -0.8
UBR4-201ENST00000375218 DNTTP04053 509 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 PCP11498 1178 aaKnown RBP10.02□□□□□ -0.8
UBR4-201ENST00000375218 ARSHQ5FYA8 562 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 ITPRIPL1Q6GPH6 555 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 ZNF654Q8IZM8 581 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 CCDC191Q8NCU4 936 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 CCDC26Q8TAB7 109 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 FBF1Q8TES7 1133 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 TRIM63Q969Q1 353 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 CTNNA3Q9UI47 895 aa10.02□□□□□ -0.8
UBR4-201ENST00000375218 COL14A1Q05707 1796 aaKnown RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 COBLO75128 1261 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 GUCY1B3Q02153 619 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 OASLQ15646 514 aaKnown RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 IFFO2Q5TF58 517 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 EPS8L3Q8TE67 593 aaKnown RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 KIAA0232Q92628 1395 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 NDC80O14777 642 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 ABCC4O15439 1325 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 ZBED4O75132 1171 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 ZNF189O75820 626 aaPredicted RBP10.02□□□□□ -0.81
UBR4-201ENST00000375218 SCG2P13521 617 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 MFSD10Q14728 455 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 KIF24Q5T7B8 1368 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 CNDP1Q96KN2 507 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.81
UBR4-201ENST00000375218 DDX60Q8IY21 1712 aaKnown RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 NEBLO76041 1014 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 SART3Q15020 963 aaKnown RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 ECM1Q16610 540 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 CENPQQ7L2Z9 268 aaPredicted RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 CCDC144CPQ8IYA2 1237 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 LINC00469Q8N7U9 141 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 MAGEB6Q8N7X4 407 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 IP6K1Q92551 441 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 SH3GL3Q99963 347 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 PHACTR1Q9C0D0 580 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 GLT8D2Q9H1C3 349 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 BRD9Q9H8M2 597 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 NFKBIL1Q9UBC1 381 aaPredicted RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 SQORQ9Y6N5 450 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 H3BRJ5 948 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 M0QX08 132 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 NASPP49321 788 aaPredicted RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 SEPT6Q14141 434 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 RBBP5Q15291 538 aaKnown RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 GFOD2Q3B7J2 385 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 ANKRD20A12PQ8NF67 263 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 COG3Q96JB2 828 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 ZNF700Q9H0M5 742 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 RASSF4Q9H2L5 321 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 IFT80Q9P2H3 777 aaPredicted RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 SH3BGRL2Q9UJC5 107 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 K7ENM7 598 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 DGKIO75912 1065 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 MT-ND3P03897 115 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms