RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 AKR1A1P14550 325 aa17.15■□□□□ 0.34
HSPG2-201ENST00000374673 KRT25Q7Z3Z0 450 aa17.15■□□□□ 0.34
HSPG2-201ENST00000374673 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
HSPG2-201ENST00000374673 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
HSPG2-201ENST00000374673 OXER1Q8TDS5 423 aa17.15■□□□□ 0.34
HSPG2-201ENST00000374673 TNFRSF25Q93038 417 aa17.15■□□□□ 0.34
HSPG2-201ENST00000374673 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
HSPG2-201ENST00000374673 MSCO60682 206 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 CYP3A4P08684 503 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 CNGA1P29973 690 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 ARHGAP4P98171 946 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 BECN1Q14457 450 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 SAFBQ15424 915 aaKnown RBP eCLIP17.14■□□□□ 0.33
HSPG2-201ENST00000374673 CCDC144BQ3MJ40 725 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 INPP4AQ96PE3 977 aaPredicted RBP17.14■□□□□ 0.33
HSPG2-201ENST00000374673 RNF208Q9H0X6 261 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 PDGFCQ9NRA1 345 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
HSPG2-201ENST00000374673 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
HSPG2-201ENST00000374673 CCDC194A0A1B0GVG4 234 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 BTBD18B2RXH4 712 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 RGS20O76081 388 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 ADCYAP1R1P41586 468 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 NR5A1Q13285 461 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 NONOQ15233 471 aaKnown RBP eCLIP17.13■□□□□ 0.33
HSPG2-201ENST00000374673 GNPTABQ3T906 1256 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
HSPG2-201ENST00000374673 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 SCFD2Q8WU76 684 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 UBIAD1Q9Y5Z9 338 aa17.13■□□□□ 0.33
HSPG2-201ENST00000374673 MYCP01106 439 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-201ENST00000374673 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
HSPG2-201ENST00000374673 GJB1P08034 283 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 PDCP20941 246 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 ICAM3P32942 547 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 TTLL4Q14679 1199 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 KCNV1Q6PIU1 500 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 SEPT14Q6ZU15 432 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-201ENST00000374673 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-201ENST00000374673 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
HSPG2-201ENST00000374673 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-201ENST00000374673 H3BQV1 296 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 ADCY6O43306 1168 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 EDIL3O43854 480 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 ITGB5P18084 799 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 CIITAP33076 1130 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 USP11P51784 963 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
HSPG2-201ENST00000374673 IFFO2Q5TF58 517 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 LHX8Q68G74 356 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 CCDC62Q6P9F0 684 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 GPRASP2Q96D09 838 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 DEFB118Q96PH6 123 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
HSPG2-201ENST00000374673 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
HSPG2-201ENST00000374673 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.33
HSPG2-201ENST00000374673 MAFGO15525 162 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 FIBPO43427 364 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
HSPG2-201ENST00000374673 ARIH2O95376 493 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 TGFB3P10600 412 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 RARBP10826 455 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 SMPD1P17405 629 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 CAPN2P17655 700 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
HSPG2-201ENST00000374673 INF2Q27J81 1249 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 MOXD1Q6UVY6 613 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 NIPA1Q7RTP0 329 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
HSPG2-201ENST00000374673 Q9Y3F1 56 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
HSPG2-201ENST00000374673 IGLV3-22A0A075B6J6 115 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 SPATA31C2B4DYI2 1134 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 KIF28PB7ZC32 967 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 MEIS1O00470 390 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 SGPL1O95470 568 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
HSPG2-201ENST00000374673 ZNF76P36508 570 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 GJA8P48165 433 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 ANO1Q5XXA6 986 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 NEK8Q86SG6 692 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
HSPG2-201ENST00000374673 CDHR1Q96JP9 859 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
HSPG2-201ENST00000374673 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
HSPG2-201ENST00000374673 FAM205CA6NFA0 338 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms