RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 RTEL1Q9NZ71 1219 aa17.4■□□□□ 0.38
PFDN6-202ENST00000374607 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
PFDN6-202ENST00000374607 STAM2O75886 525 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 ZNF865P0CJ78 1059 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-202ENST00000374607 EDNRBP24530 442 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
PFDN6-202ENST00000374607 TNFAIP2Q03169 654 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 TTLL4Q14679 1199 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 PCNX4Q63HM2 1172 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 KRT40Q6A162 431 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 IQSEC1Q6DN90 963 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 VSIG10LQ86VR7 867 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 TRPV1Q8NER1 839 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 SCFD2Q8WU76 684 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-202ENST00000374607 WDR11Q9BZH6 1224 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 GJB4Q9NTQ9 266 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
PFDN6-202ENST00000374607 MMP1P03956 469 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 GJB1P08034 283 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 ADCYAP1R1P41586 468 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 CUL4AQ13619 759 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 KRT25Q7Z3Z0 450 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 DAGLBQ8NCG7 672 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 IL31RAQ8NI17 732 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 PDGFCQ9NRA1 345 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 LCTP09848 1927 aa17.38■□□□□ 0.37
PFDN6-202ENST00000374607 SGPL1O95470 568 aa17.37■□□□□ 0.37
PFDN6-202ENST00000374607 IGHA2P01877 340 aa17.37■□□□□ 0.37
PFDN6-202ENST00000374607 TXNP10599 105 aaKnown RBP17.37■□□□□ 0.37
PFDN6-202ENST00000374607 ARHGAP4P98171 946 aa17.37■□□□□ 0.37
PFDN6-202ENST00000374607 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
PFDN6-202ENST00000374607 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
PFDN6-202ENST00000374607 KCNV1Q6PIU1 500 aa17.37■□□□□ 0.37
PFDN6-202ENST00000374607 U2AF1L4Q8WU68 220 aaKnown RBP17.37■□□□□ 0.37
PFDN6-202ENST00000374607 INTS4Q96HW7 963 aaKnown RBP17.37■□□□□ 0.37
PFDN6-202ENST00000374607 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
PFDN6-202ENST00000374607 HTTP42858 3142 aa17.37■□□□□ 0.37
PFDN6-202ENST00000374607 PDCP20941 246 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 SREBF1P36956 1147 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
PFDN6-202ENST00000374607 MCTP1Q6DN14 999 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 TAPT1Q6NXT6 567 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
PFDN6-202ENST00000374607 SHISA4Q96DD7 197 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 CDHR1Q96JP9 859 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 XPNPEP3Q9NQH7 507 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 FRMPD4Q14CM0 1322 aa17.36■□□□□ 0.37
PFDN6-202ENST00000374607 MCM3APO60318 1980 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.35■□□□□ 0.37
PFDN6-202ENST00000374607 NKRFO15226 690 aaKnown RBP eCLIP17.35■□□□□ 0.37
PFDN6-202ENST00000374607 DUSP11O75319 330 aaKnown RBP17.35■□□□□ 0.37
PFDN6-202ENST00000374607 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
PFDN6-202ENST00000374607 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 SPRYD3Q8NCJ5 442 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 ARRDC4Q8NCT1 418 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 FBXO18Q8NFZ0 1043 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 TBCKQ8TEA7 893 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 KATNBL1Q9H079 304 aa17.35■□□□□ 0.37
PFDN6-202ENST00000374607 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
PFDN6-202ENST00000374607 BTBD18B2RXH4 712 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 ADAMTS3O15072 1205 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 DYNC1LI2O43237 492 aaPredicted RBP17.34■□□□□ 0.37
PFDN6-202ENST00000374607 FIBPO43427 364 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 C6orf222P0C671 652 aaPredicted RBP17.34■□□□□ 0.37
PFDN6-202ENST00000374607 SMPD1P17405 629 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 CAPN2P17655 700 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 GJA8P48165 433 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 MRPS9P82933 396 aaKnown RBP17.34■□□□□ 0.37
PFDN6-202ENST00000374607 NR5A1Q13285 461 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 MTMR1Q13613 665 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 DUSP28Q4G0W2 176 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 RNF180Q86T96 592 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 TLK2Q86UE8 772 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 OR6J1Q8NGC5 347 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 OXER1Q8TDS5 423 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 LENG1Q96BZ8 264 aaPredicted RBP17.34■□□□□ 0.37
PFDN6-202ENST00000374607 MXRA8Q9BRK3 442 aa17.34■□□□□ 0.37
PFDN6-202ENST00000374607 RBM47A0AV96 593 aaKnown RBP17.33■□□□□ 0.36
PFDN6-202ENST00000374607 KBTBD13C9JR72 458 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 ZEB2O60315 1214 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 TGFB3P10600 412 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 USP11P51784 963 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 INF2Q27J81 1249 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 LETM2Q2VYF4 491 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 CEP55Q53EZ4 464 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 DHX37Q8IY37 1157 aaKnown RBP17.33■□□□□ 0.36
PFDN6-202ENST00000374607 GPRASP2Q96D09 838 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 MLXIPQ9HAP2 919 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 JADE2Q9NQC1 790 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 PKD2L1Q9P0L9 805 aa17.33■□□□□ 0.36
PFDN6-202ENST00000374607 POTEFA5A3E0 1075 aa17.32■□□□□ 0.36
PFDN6-202ENST00000374607 VPS37CA5D8V6 355 aaPredicted RBP17.32■□□□□ 0.36
PFDN6-202ENST00000374607 MAFGO15525 162 aa17.32■□□□□ 0.36
PFDN6-202ENST00000374607 MARCH6O60337 910 aa17.32■□□□□ 0.36
PFDN6-202ENST00000374607 SORBS3O60504 671 aa17.32■□□□□ 0.36
PFDN6-202ENST00000374607 PGK1P00558 417 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms