RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PPFIA3O75145 1194 aa23.3■■□□□ 1.32
SYNC-201ENST00000373484 SCG2P13521 617 aa23.3■■□□□ 1.32
SYNC-201ENST00000373484 PKN1Q16512 942 aa23.3■■□□□ 1.32
SYNC-201ENST00000373484 NECAB1Q8N987 351 aa23.3■■□□□ 1.32
SYNC-201ENST00000373484 SYTL5Q8TDW5 730 aaPredicted RBP23.3■■□□□ 1.32
SYNC-201ENST00000373484 NUP62CLQ9H1M0 184 aa23.3■■□□□ 1.32
SYNC-201ENST00000373484 ADD3Q9UEY8 706 aaKnown RBP23.3■■□□□ 1.32
SYNC-201ENST00000373484 RPTORQ8N122 1335 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 AKAP17AQ02040 695 aaKnown RBP23.29■■□□□ 1.32
SYNC-201ENST00000373484 LARP1BQ659C4 914 aaKnown RBP23.29■■□□□ 1.32
SYNC-201ENST00000373484 DNERQ8NFT8 737 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 BARHL2Q9NY43 387 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 COL20A1Q9P218 1284 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 STXBP3O00186 592 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 CDKL5O76039 1030 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 MYCP01106 439 aaPredicted RBP23.29■■□□□ 1.32
SYNC-201ENST00000373484 CCL5P13501 91 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 SSRP1Q08945 709 aaKnown RBP23.29■■□□□ 1.32
SYNC-201ENST00000373484 ST3GAL1Q11201 340 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 SYCP1Q15431 976 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 UTP14CQ5TAP6 766 aaKnown RBP23.29■■□□□ 1.32
SYNC-201ENST00000373484 TYW1BQ6NUM6 668 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 TRIM22Q8IYM9 498 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 UNC93B1Q9H1C4 597 aa23.29■■□□□ 1.32
SYNC-201ENST00000373484 LOC102724159A0A0B4J2E5 919 aa23.28■■□□□ 1.32
SYNC-201ENST00000373484 ASB14A6NK59 587 aa23.28■■□□□ 1.32
SYNC-201ENST00000373484 GCOM1H8Y6P7 765 aaPredicted RBP23.28■■□□□ 1.32
SYNC-201ENST00000373484 POLR2MP0CAP2 368 aa23.28■■□□□ 1.32
SYNC-201ENST00000373484 CYBAP13498 195 aa23.28■■□□□ 1.32
SYNC-201ENST00000373484 ALDH5A1P51649 535 aaPredicted RBP23.28■■□□□ 1.32
SYNC-201ENST00000373484 PWP2Q15269 919 aaKnown RBP23.28■■□□□ 1.32
SYNC-201ENST00000373484 ARMCX2Q7L311 632 aa23.28■■□□□ 1.32
SYNC-201ENST00000373484 KIAA0100Q14667 2235 aaKnown RBP23.28■■□□□ 1.32
SYNC-201ENST00000373484 CTDNEP1O95476 244 aa23.27■■□□□ 1.32
SYNC-201ENST00000373484 SNAI1O95863 264 aaPredicted RBP23.27■■□□□ 1.32
SYNC-201ENST00000373484 NAPAP54920 295 aa23.27■■□□□ 1.32
SYNC-201ENST00000373484 ZNF830Q96NB3 372 aaPredicted RBP23.27■■□□□ 1.32
SYNC-201ENST00000373484 HMX1Q9NP08 348 aaPredicted RBP23.27■■□□□ 1.32
SYNC-201ENST00000373484 NRBP1Q9UHY1 535 aa23.27■■□□□ 1.32
SYNC-201ENST00000373484 KIAA1217Q5T5P2 1943 aa23.27■■□□□ 1.32
SYNC-201ENST00000373484 HOXA13P31271 388 aaPredicted RBP23.26■■□□□ 1.31
SYNC-201ENST00000373484 TRPV1Q8NER1 839 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 TAAR1Q96RJ0 339 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 PAK6Q9NQU5 681 aaPredicted RBP23.26■■□□□ 1.31
SYNC-201ENST00000373484 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.26■■□□□ 1.31
SYNC-201ENST00000373484 STK36Q9NRP7 1315 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 VPS37CA5D8V6 355 aaPredicted RBP23.26■■□□□ 1.31
SYNC-201ENST00000373484 PIK3CDO00329 1044 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 MEIS2O14770 477 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 DEXIO95424 95 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.26■■□□□ 1.31
SYNC-201ENST00000373484 RNF208Q9H0X6 261 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 PSTPIP2Q9H939 334 aa23.26■■□□□ 1.31
SYNC-201ENST00000373484 CTIFO43310 598 aaKnown RBP23.25■■□□□ 1.31
SYNC-201ENST00000373484 CCND3P30281 292 aaPredicted RBP23.25■■□□□ 1.31
SYNC-201ENST00000373484 TYRO3Q06418 890 aa23.25■■□□□ 1.31
SYNC-201ENST00000373484 PRAMEF19Q5SWL8 479 aa23.25■■□□□ 1.31
SYNC-201ENST00000373484 ZNF710Q8N1W2 664 aa23.25■■□□□ 1.31
SYNC-201ENST00000373484 KCNF1Q9H3M0 494 aa23.25■■□□□ 1.31
SYNC-201ENST00000373484 PRDM4Q9UKN5 801 aa23.25■■□□□ 1.31
SYNC-201ENST00000373484 CCDC85CA6NKD9 419 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 EDNRBP24530 442 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 USP17L6PQ6QN14 398 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 NSUN6Q8TEA1 469 aaKnown RBP23.24■■□□□ 1.31
SYNC-201ENST00000373484 CUL5Q93034 780 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 RMDN3Q96TC7 470 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 NSUN7Q8NE18 718 aaKnown RBP23.24■■□□□ 1.31
SYNC-201ENST00000373484 CCDC12Q8WUD4 166 aaPredicted RBP23.24■■□□□ 1.31
SYNC-201ENST00000373484 TMEM106CQ9BVX2 250 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 KATNBL1Q9H079 304 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 ABHD16BQ9H3Z7 469 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 PXMP2Q9NR77 195 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 MRVI1Q9Y6F6 885 aa23.24■■□□□ 1.31
SYNC-201ENST00000373484 AP5Z1O43299 807 aa23.23■■□□□ 1.31
SYNC-201ENST00000373484 ZNF865P0CJ78 1059 aaPredicted RBP23.23■■□□□ 1.31
SYNC-201ENST00000373484 CDC25BP30305 580 aa23.23■■□□□ 1.31
SYNC-201ENST00000373484 TEX2Q8IWB9 1127 aa23.23■■□□□ 1.31
SYNC-201ENST00000373484 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
SYNC-201ENST00000373484 MPHOSPH6Q99547 160 aaKnown RBP23.23■■□□□ 1.31
SYNC-201ENST00000373484 CLSTN2Q9H4D0 955 aa23.23■■□□□ 1.31
SYNC-201ENST00000373484 ESYT2A0FGR8 921 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 SMCO2A6NFE2 343 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 B4DLN1 442 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 GJB1P08034 283 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 MRPL12P52815 198 aaKnown RBP23.22■■□□□ 1.31
SYNC-201ENST00000373484 FCHSD1Q86WN1 690 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 ANKRD7Q92527 254 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 SHISA4Q96DD7 197 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 IWS1Q96ST2 819 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 SH3GLB2Q9NR46 395 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 DTNBO60941 627 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 ADCY7P51828 1080 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 ACVR2BQ13705 512 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 ARHGEF16Q5VV41 709 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 ZMYND12Q9H0C1 365 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 GLT8D2Q9H1C3 349 aa23.22■■□□□ 1.31
SYNC-201ENST00000373484 TNMDQ9H2S6 317 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms