RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TERF2Q15554 542 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 MEA1Q16626 185 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 TMEM119Q4V9L6 283 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 CCDC122Q5T0U0 273 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 NOA1Q8NC60 698 aaKnown RBP26.54■■□□□ 1.84
CDK9-201ENST00000373264 SCN9AQ15858 1988 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 SIPA1L1O43166 1804 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 MARCH6O60337 910 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 PDIA5Q14554 519 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 SEPT2Q15019 361 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 ARFGEF1Q9Y6D6 1849 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 ATP1A1P05023 1023 aaKnown RBP26.53■■□□□ 1.84
CDK9-201ENST00000373264 JAG1P78504 1218 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 TSR1Q2NL82 804 aaKnown RBP26.53■■□□□ 1.84
CDK9-201ENST00000373264 PPP4R3AQ6IN85 833 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 ZCCHC17Q9NP64 241 aaKnown RBP26.53■■□□□ 1.84
CDK9-201ENST00000373264 PCDHA1Q9Y5I3 950 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 ZNF263O14978 683 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 ORC2Q13416 577 aaPredicted RBP26.53■■□□□ 1.84
CDK9-201ENST00000373264 MTMR8Q96EF0 704 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 KANSL2Q9H9L4 492 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 SUGCTQ9HAC7 445 aa26.53■■□□□ 1.84
CDK9-201ENST00000373264 SLC1A4P43007 532 aa26.52■■□□□ 1.84
CDK9-201ENST00000373264 GPATCH4Q5T3I0 446 aaKnown RBP26.52■■□□□ 1.84
CDK9-201ENST00000373264 NLGN1Q8N2Q7 840 aa26.52■■□□□ 1.84
CDK9-201ENST00000373264 DNAJC19Q96DA6 116 aa26.52■■□□□ 1.84
CDK9-201ENST00000373264 RNF216Q9NWF9 866 aaPredicted RBP26.52■■□□□ 1.84
CDK9-201ENST00000373264 PCDHA12Q9UN75 941 aa26.52■■□□□ 1.84
CDK9-201ENST00000373264 ATF5Q9Y2D1 282 aaPredicted RBP26.52■■□□□ 1.84
CDK9-201ENST00000373264 GREB1LQ9C091 1923 aaPredicted RBP26.52■■□□□ 1.84
CDK9-201ENST00000373264 MRPL12P52815 198 aaKnown RBP26.51■■□□□ 1.84
CDK9-201ENST00000373264 GABPB1Q06547 395 aaPredicted RBP26.51■■□□□ 1.84
CDK9-201ENST00000373264 POTEB3A0JP26 581 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 POTECB2RU33 542 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 POLR3GO15318 223 aaPredicted RBP26.51■■□□□ 1.83
CDK9-201ENST00000373264 ZBED6P86452 979 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 EHHADHQ08426 723 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 VWA3BQ502W6 1294 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 POTEBQ6S5H4 581 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 ZNF771Q7L3S4 317 aaPredicted RBP26.51■■□□□ 1.83
CDK9-201ENST00000373264 FAM114A1Q8IWE2 563 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 NDST4Q9H3R1 872 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 MYO6Q9UM54 1294 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 KIAA1024Q9UPX6 916 aa26.51■■□□□ 1.83
CDK9-201ENST00000373264 PVALEFA0A1B0GWK0 134 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 ALDH1B1P30837 517 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 SEMA3FQ13275 785 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 CDC37Q16543 378 aaPredicted RBP26.5■■□□□ 1.83
CDK9-201ENST00000373264 CERKLQ49MI3 558 aaPredicted RBP26.5■■□□□ 1.83
CDK9-201ENST00000373264 LRRC55Q6ZSA7 311 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 KIAA1328Q86T90 577 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 CEP112Q8N8E3 955 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 SMCR8Q8TEV9 937 aaPredicted RBP26.5■■□□□ 1.83
CDK9-201ENST00000373264 ZDHHC15Q96MV8 337 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 ERGIC2Q96RQ1 377 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 RAB34Q9BZG1 259 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 SIK3Q9Y2K2 1263 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 COASYQ13057 564 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 SLFN13Q68D06 897 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 AKT1S1Q96B36 256 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 FUT8Q9BYC5 575 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 ARFGAP3Q9NP61 516 aa26.5■■□□□ 1.83
CDK9-201ENST00000373264 MACROD2A1Z1Q3 448 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 USH1GQ495M9 461 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 PPP1R18Q6NYC8 613 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 JAKMIP2Q96AA8 810 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 MASTLQ96GX5 879 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 MMRN2Q9H8L6 949 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 LONRF2Q1L5Z9 754 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 COBLL1Q53SF7 1204 aa26.49■■□□□ 1.83
CDK9-201ENST00000373264 GUF1Q8N442 669 aaKnown RBP26.49■■□□□ 1.83
CDK9-201ENST00000373264 APBA1Q02410 837 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 FKBP15Q5T1M5 1219 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 NELFCDQ8IXH7 590 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 CAPZA3Q96KX2 299 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 HAUS4Q9H6D7 363 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 MYO3BQ8WXR4 1341 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 SMCHD1A6NHR9 2005 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 CHRNA5P30532 468 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 RRP1BQ14684 758 aaKnown RBP26.48■■□□□ 1.83
CDK9-201ENST00000373264 DACT2Q5SW24 774 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 C2CD5Q86YS7 1000 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 ARHGAP20Q9P2F6 1191 aa26.48■■□□□ 1.83
CDK9-201ENST00000373264 ECE2O60344 883 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 PDE6BP35913 854 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 NUP58Q9BVL2 599 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 ANO3Q9BYT9 981 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 POLD4Q9HCU8 107 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 MYO1AQ9UBC5 1043 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 MEIS2O14770 477 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 EHD4Q9H223 541 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 TDRD3Q9H7E2 651 aaKnown RBP26.47■■□□□ 1.83
CDK9-201ENST00000373264 PANK4Q9NVE7 773 aa26.47■■□□□ 1.83
CDK9-201ENST00000373264 ZNHIT6Q9NWK9 470 aaKnown RBP26.47■■□□□ 1.83
CDK9-201ENST00000373264 CTAGE15A4D2H0 777 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 ZNF185O15231 689 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 MED24O75448 989 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 CTAGE8P0CG41 777 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 VSNL1P62760 191 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 SLC30A10Q6XR72 485 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms