RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 LAMB2P55268 1798 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 KIF5BP33176 963 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 LSP1P33241 339 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 SLC1A4P43007 532 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 ITIH3Q06033 890 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
COL9A2-202ENST00000372748 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 CABP7Q86V35 215 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 ZSCAN29Q8IWY8 852 aaPredicted RBP16.39■□□□□ 0.21
COL9A2-202ENST00000372748 PCDHA6Q9UN73 950 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 PCDHA8Q9Y5H6 950 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 A0A1W2PQJ5 194 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 HEXIM1O94992 359 aaKnown RBP16.38■□□□□ 0.21
COL9A2-202ENST00000372748 GOLGA8HP0CJ92 632 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 PRLRP16471 622 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 CCDC91Q7Z6B0 441 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 KIAA0895Q8NCT3 520 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 CAVIN3Q969G5 261 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 GPR101Q96P66 508 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-202ENST00000372748 NDST4Q9H3R1 872 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 GRIK5Q16478 980 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 RNF187Q5TA31 235 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-202ENST00000372748 KLHDC7AQ5VTJ3 777 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 B4GALNT4Q76KP1 1039 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-202ENST00000372748 CCSER1Q9C0I3 900 aa16.38■□□□□ 0.21
COL9A2-202ENST00000372748 PACSIN2Q9UNF0 486 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-202ENST00000372748 SPATA31A5Q5VU36 1347 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 SPATA31A7Q8IWB4 1347 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 MEFVO15553 781 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-202ENST00000372748 VWA3BQ502W6 1294 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 NAA35Q5VZE5 725 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 CNPY4Q8N129 248 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 CENPHQ9H3R5 247 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 STX8Q9UNK0 236 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 SIK3Q9Y2K2 1263 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 FTCDO95954 541 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 SLC35G1Q2M3R5 365 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
COL9A2-202ENST00000372748 SLC10A5Q5PT55 438 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 IQCKQ8N0W5 287 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
COL9A2-202ENST00000372748 JPH2Q9BR39 696 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-202ENST00000372748 TCP11L1Q9NUJ3 509 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 SAP30BPQ9UHR5 308 aaKnown RBP16.37■□□□□ 0.21
COL9A2-202ENST00000372748 FLT1P17948 1338 aa16.37■□□□□ 0.21
COL9A2-202ENST00000372748 MYL1P05976 194 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 HPDP32754 393 aaPredicted RBP16.36■□□□□ 0.21
COL9A2-202ENST00000372748 FNTAP49354 379 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 LETM2Q2VYF4 491 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
COL9A2-202ENST00000372748 NLRC4Q9NPP4 1024 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 NR1D1P20393 614 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 HNRNPH3P31942 346 aaKnown RBP16.36■□□□□ 0.21
COL9A2-202ENST00000372748 TECP42680 631 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 CFAP221Q4G0U5 840 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 KRT12Q99456 494 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 CYTH3O43739 400 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 TSPY3P0CV98 308 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 TSPY8P0CW00 308 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 ENOX2Q16206 610 aaKnown RBP16.36■□□□□ 0.21
COL9A2-202ENST00000372748 C12orf60Q5U649 245 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 NOX5Q96PH1 765 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 MAD2L2Q9UI95 211 aa16.36■□□□□ 0.21
COL9A2-202ENST00000372748 DLEC1Q9Y238 1755 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 GNPATO15228 680 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 MAP2K2P36507 400 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 USP8P40818 1118 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
COL9A2-202ENST00000372748 DYMQ7RTS9 669 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 CACNA2D4Q7Z3S7 1137 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 ZNF473Q8WTR7 871 aaKnown RBP16.35■□□□□ 0.21
COL9A2-202ENST00000372748 TANGO6Q9C0B7 1094 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 EPN3Q9H201 632 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 RREB1Q92766 1687 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 M0R2N6 131 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 CCNT1O60563 726 aaKnown RBP16.35■□□□□ 0.21
COL9A2-202ENST00000372748 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
COL9A2-202ENST00000372748 KDM7AQ6ZMT4 941 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 MAATS1Q7Z4T9 603 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 RUBCNQ92622 972 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 CABS1Q96KC9 395 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 CD248Q9HCU0 757 aa16.35■□□□□ 0.21
COL9A2-202ENST00000372748 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms