RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, human

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCMH1-207	ENST00000372597	DDX12P	Q92771	950 aa		11.83	□□□□□ -0.52
SCMH1-207	ENST00000372597	STK17A	Q9UEE5	414 aa		11.83	□□□□□ -0.52
SCMH1-207	ENST00000372597	CACNA1S	Q13698	1873 aa		11.83	□□□□□ -0.52
SCMH1-207	ENST00000372597	TDP2	O95551	362 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	PICALM	Q13492	652 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	SLC9C1	Q4G0N8	1177 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	TTC19	Q6DKK2	380 aa	Predicted RBP	11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	CCDC155	Q8N6L0	562 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	LRRC27	Q9C0I9	530 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	GRB10	Q13322	594 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	NELFCD	Q8IXH7	590 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	MYOCD	Q8IZQ8	938 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	LRRC47	Q8N1G4	583 aa	Known RBP	11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	GUF1	Q8N442	669 aa	Known RBP	11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	MMTAG2	Q9BU76	263 aa	Known RBP	11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	PVALEF	A0A1B0GWK0	134 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	SHTN1	A0MZ66	631 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	NT5C2	P49902	561 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	LRRC63	Q05C16	580 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	RAPGEF1	Q13905	1077 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	CFAP221	Q4G0U5	840 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	STIM2	Q9P246	746 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	NARF	Q9UHQ1	456 aa		11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	THRAP3	Q9Y2W1	955 aa	Known RBP	11.82	□□□□□ -0.52
SCMH1-207	ENST00000372597	TAF1	P21675	1872 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	EBAG9	O00559	213 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	SLC1A4	P43007	532 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	POLR2F	P61218	127 aa	Known RBP	11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	PPFIA1	Q13136	1202 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	SFMBT2	Q5VUG0	894 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	MMGT1	Q8N4V1	131 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	NEDD1	Q8NHV4	660 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	RTCB	Q9Y3I0	505 aa	Known RBP	11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	CCT5	P48643	541 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	NFIX	Q14938	502 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	FAM98C	Q17RN3	349 aa	Known RBP	11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	TMC4	Q7Z404	712 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	MS4A14	Q96JA4	679 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	CAPS2	Q9BXY5	557 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	KANSL2	Q9H9L4	492 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	SIK3	Q9Y2K2	1263 aa		11.81	□□□□□ -0.52
SCMH1-207	ENST00000372597	SLC37A4	O43826	429 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	RPS6KA5	O75582	802 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	UFL1	O94874	794 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	PRPF6	O94906	941 aa	Known RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	PLCG2	P16885	1265 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	EPHB4	P54760	987 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	GNGT1	P63211	74 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	FKBP3	Q00688	224 aa	Known RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	TTC31	Q49AM3	519 aa	Predicted RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	BCAS4	Q8TDM0	211 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	TAF4B	Q92750	862 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	PURB	Q96QR8	312 aa	Known RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	LSM14B	Q9BX40	385 aa	Known RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	CENPH	Q9H3R5	247 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	BLOC1S4	Q9NUP1	217 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	LEMD3	Q9Y2U8	911 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	COL4A1	P02462	1669 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	FTCD	O95954	541 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	RFC4	P35249	363 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	UBE2S	Q16763	222 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	FAM26F	Q5R3K3	315 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	SLC51A	Q86UW1	340 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	IFT20	Q8IY31	132 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	GLIS3	Q8NEA6	775 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	RAD54L	Q92698	747 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	RPGR	Q92834	1020 aa	Known RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	PANK4	Q9NVE7	773 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	ZEB2	O60315	1214 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	MAGEA9	P43362	315 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	MFSD14B	Q5SR56	506 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	CFAP58	Q5T655	872 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	KCTD16	Q68DU8	428 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	GJA10	Q969M2	543 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	RIC8A	Q9NPQ8	531 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	RBM12	Q9NTZ6	932 aa	Known RBP	11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	COL4A3BP	Q9Y5P4	624 aa		11.8	□□□□□ -0.52
SCMH1-207	ENST00000372597	ESYT3	A0FGR9	886 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	GOLGA8K	D6RF30	607 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	MPHOSPH10	O00566	681 aa	Known RBP	11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	PPP4C	P60510	307 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	CACNB1	Q02641	598 aa	Predicted RBP	11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	GUCY2D	Q02846	1103 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	SLC20A2	Q08357	652 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	KIAA0753	Q2KHM9	967 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	PDXDC1	Q6P996	788 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	MICALL1	Q8N3F8	863 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	AEN	Q8WTP8	325 aa	Known RBP	11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	PPM1E	Q8WY54	764 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	TBC1D5	Q92609	795 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	PNMA5	Q96PV4	448 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	NUDT12	Q9BQG2	462 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	PCDHA12	Q9UN75	941 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597		F8W031	263 aa	Predicted RBP	11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	AGPS	O00116	658 aa		11.79	□□□□□ -0.52
SCMH1-207	ENST00000372597	HNRNPH3	P31942	346 aa	Known RBP	11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms