RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 STAMQ92783 540 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 XPO4Q9C0E2 1151 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 FAM205AQ6ZU69 1335 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 COL18A1P39060 1754 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 ARFGEF2Q9Y6D5 1785 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 CCDC175P0C221 793 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 C11orf91Q3C1V1 193 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 C11orf57Q6ZUT1 292 aaPredicted RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 ADGRA1Q86SQ6 560 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 GOLPH3LQ9H4A5 285 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 HERC5Q9UII4 1024 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 DKC1O60832 514 aaKnown RBP eCLIP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 ENTPD3O75355 529 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 RPS6KA5O75582 802 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 RPN1P04843 607 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 CCNHP51946 323 aaPredicted RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 DDR1Q08345 913 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 PPFIA2O75334 1257 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 TADA3O75528 432 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 RHOXF2BP0C7M4 288 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 GUCY1A2P33402 732 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 SLC16A2P36021 539 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 CACNB3P54284 484 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 DPCR1Q3MIW9 517 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 CCDC144BQ3MJ40 725 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 USP37Q86T82 979 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 PLA2G4DQ86XP0 818 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 IGSF22Q8N9C0 903 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 COA7Q96BR5 231 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 LUC7L2Q9Y383 392 aaKnown RBP11.06□□□□□ -0.64
KDM4A-201ENST00000372396 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 GOLGA6CA6NDK9 693 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 ZBTB5O15062 677 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 RNF40O75150 1001 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 GOLGA6DP0CG33 693 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 AKR1B1P15121 316 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 STAT2P52630 851 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 USP14P54578 494 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 MTA1Q13330 715 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
KDM4A-201ENST00000372396 CDC42EP5Q6NZY7 148 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 YIPF3Q9GZM5 350 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 GOLGA6AQ9NYA3 693 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 MTMR4Q9NYA4 1195 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 STK17AQ9UEE5 414 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 SERPINA10Q9UK55 444 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 TM4SF1P30408 202 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 ST3GAL1Q11201 340 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 CPXCR1Q8N123 301 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 RTFDC1Q9BY42 306 aaPredicted RBP11.06□□□□□ -0.64
KDM4A-201ENST00000372396 BATF3Q9NR55 127 aa11.06□□□□□ -0.64
KDM4A-201ENST00000372396 SKAP2O75563 359 aaPredicted RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 GH2P01242 217 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 KRT13P13646 458 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 KARSQ15046 597 aaKnown RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 EZH2Q15910 746 aaKnown RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 LONRF3Q496Y0 759 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 PRR16Q569H4 304 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 TRMT44Q8IYL2 757 aaKnown RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 EPC1Q9H2F5 836 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 KLC4Q9NSK0 619 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 C5P01031 1676 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 AP5Z1O43299 807 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 ASNSP08243 561 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 RPS6KA3P51812 740 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 TROAPQ12815 778 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 SEC23AQ15436 765 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 SLC30A9Q6PML9 568 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 ARHGAP27Q6ZUM4 889 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 IQCDQ96DY2 449 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 NOC4LQ9BVI4 516 aaKnown RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 NUP58Q9BVL2 599 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 ZNRF3Q9ULT6 936 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 RABGAP1Q9Y3P9 1069 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 TRAF5O00463 557 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 PECAM1P16284 738 aaPredicted RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 KRT83P78385 493 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 LAMB3Q13751 1172 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 RCSD1Q6JBY9 416 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 SPDYE1Q8NFV5 336 aaPredicted RBP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 MAPK8IP1Q9UQF2 711 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
KDM4A-201ENST00000372396 AKR1B10O60218 316 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 SMIM24O75264 130 aa11.05□□□□□ -0.64
KDM4A-201ENST00000372396 SASH3O75995 380 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms