RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CHST3Q7LGC8 479 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 MARCH10Q8NA82 808 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 MIPOL1Q8TD10 442 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 RIN2Q8WYP3 895 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 AGAP3Q96P47 875 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 TMEM165Q9HC07 324 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 PICK1Q9NRD5 415 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 HOOK1Q9UJC3 728 aaKnown RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 C15orf41Q9Y2V0 281 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 PPME1Q9Y570 386 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 PTPDC1A2A3K4 754 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 MCM3P25205 808 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 ADD2P35612 726 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 PDE6BP35913 854 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 SIK1P57059 783 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 HAND2P61296 217 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 DEUP1Q05D60 604 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 BLMHQ13867 455 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 TTF1Q15361 905 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-203ENST00000372232 PUM3Q15397 648 aaKnown RBP9.8□□□□□ -0.84
ATG4A-203ENST00000372232 NAA16Q6N069 864 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-203ENST00000372232 C6orf89Q6UWU4 347 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 CRELD2Q6UXH1 353 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-203ENST00000372232 LPIN2Q92539 896 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 TSC22D3Q99576 134 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 RABEP2Q9H5N1 569 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 RGS17Q9UGC6 210 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-203ENST00000372232 DOLKQ9UPQ8 538 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 MROH5Q6ZUA9 1318 aa9.8□□□□□ -0.84
ATG4A-203ENST00000372232 B4DLN1 442 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA8KD6RF30 607 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 SORBS3O60504 671 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 GNAT1P11488 350 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 FGFR2P21802 821 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 PHKA1P46020 1223 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 XRCC4Q13426 336 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 MYBPC2Q14324 1141 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 RNF187Q5TA31 235 aaPredicted RBP9.79□□□□□ -0.84
ATG4A-203ENST00000372232 SLC9C2Q5TAH2 1124 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 NAA35Q5VZE5 725 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 C17orf50Q8WW18 174 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 NUP58Q9BVL2 599 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 RBCK1Q9BYM8 510 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 TRIM7Q9C029 511 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 TRIM4Q9C037 500 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 NCOA5Q9HCD5 579 aaKnown RBP9.79□□□□□ -0.84
ATG4A-203ENST00000372232 PIH1D3Q9NQM4 214 aaKnown RBP9.79□□□□□ -0.84
ATG4A-203ENST00000372232 SALL1Q9NSC2 1324 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 SLIT2O94813 1529 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 ANKRD36CQ5JPF3 1778 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 A0A0G2JS52 829 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 CAMTA2O94983 1202 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 CTHP32929 405 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 ZNF76P36508 570 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 AFF2P51816 1311 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 ITPK1Q13572 414 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 CUL3Q13618 768 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 UBE3CQ15386 1083 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 WHAMMP3Q1A5X7 153 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 ZNF394Q53GI3 561 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 MFSD4BQ5TF39 518 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 SPATA31A5Q5VU36 1347 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 SPATA31A7Q8IWB4 1347 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 CCAR1Q8IX12 1150 aaKnown RBP9.79□□□□□ -0.84
ATG4A-203ENST00000372232 NGLY1Q96IV0 654 aa9.79□□□□□ -0.84
ATG4A-203ENST00000372232 NUP98P52948 1817 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 WNK3Q9BYP7 1800 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 DOT1LQ8TEK3 1739 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CTAGE15A4D2H0 777 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA6L10A6NI86 522 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 ZNF213O14771 459 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 IDH1O75874 414 aaKnown RBP9.78□□□□□ -0.84
ATG4A-203ENST00000372232 UQCRFS1P1P0C7P4 283 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CTAGE8P0CG41 777 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 WEE1P30291 646 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 PARP10Q53GL7 1025 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 MORN1Q5T089 497 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CTAGE6Q86UF2 777 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 APLFQ8IW19 511 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CTAGE4Q8IX94 777 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 MB21D2Q8IYB1 491 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-203ENST00000372232 SDR16C5Q8N3Y7 309 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 SLC43A3Q8NBI5 491 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CUL5Q93034 780 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 ATRNO75882 1429 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 PRC1O43663 620 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 STX10O60499 249 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 BUB1BO60566 1050 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-203ENST00000372232 MAGEA10P43363 369 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-203ENST00000372232 MYO1EQ12965 1108 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 KIAA0825Q8IV33 1275 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 NCOA7Q8NI08 942 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 HAUS2Q9NVX0 235 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 CFAP45Q9UL16 551 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 LAMA4Q16363 1823 aa9.78□□□□□ -0.84
ATG4A-203ENST00000372232 ZNF532Q9HCE3 1301 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms