RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PPARGC1AQ9UBK2 798 aaKnown RBP16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 AP1B1Q10567 949 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 HORMAD1Q86X24 394 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 AHI1Q8N157 1196 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 PYCARDQ9ULZ3 195 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 FAM95CA0A1B0GW59 222 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 CYTH1Q15438 398 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 PCGF5Q86SE9 256 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 ANO3Q9BYT9 981 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 A6NJR5 290 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 CASP10Q92851 521 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 HAUS4Q9H6D7 363 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 TRPC6Q9Y210 931 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 SRLQ86TD4 932 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 EHD2Q9NZN4 543 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 STAMBPL1Q96FJ0 436 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 CHMLP26374 656 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 LUZP2Q86TE4 346 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 LZICQ8WZA0 190 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 GPCPD1Q9NPB8 672 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 DNM2P50570 870 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 GINS2Q9Y248 185 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 ADCY2Q08462 1091 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 ZSCAN9O15535 394 aaPredicted RBP16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 CYLC2Q14093 348 aaPredicted RBP16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 SEPT3Q9UH03 358 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 ZBTB22O15209 634 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 TBL3Q12788 808 aaKnown RBP16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 STAMQ92783 540 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 KIF14Q15058 1648 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
GTF3C4-201ENST00000372146 TTC1Q99614 292 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 GCFC2P16383 781 aaKnown RBP16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 LAMB3Q13751 1172 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 ADA2Q9NZK5 511 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 EIF3BP55884 814 aaKnown RBP16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 PLAAQ9Y263 795 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 ADAM21Q9UKJ8 722 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 TRIM37O94972 964 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 MORF4L2Q15014 288 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 ANGPT1Q15389 498 aa16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 ZNF513Q8N8E2 541 aaPredicted RBP16.52■□□□□ 0.24
GTF3C4-201ENST00000372146 FAM173BQ6P4H8 233 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 SNRNP27Q8WVK2 155 aaKnown RBP16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 TMC5Q6UXY8 1006 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 NT5C3AQ9H0P0 336 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 CARD9Q9H257 536 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 RFX6Q8HWS3 928 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 STX19Q8N4C7 294 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 ZNF653Q96CK0 615 aa16.52■□□□□ 0.23
GTF3C4-201ENST00000372146 TMEM247A6NEH6 219 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 DLGAP3O95886 979 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 KCNA3P22001 575 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 POLR2FP61218 127 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 DMC1Q14565 340 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 LVRNQ6Q4G3 990 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 SYNJ2BP-COX16A0A087WUM0 186 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 GRM8O00222 908 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 SLC27A2O14975 620 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 ECEL1O95672 775 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 SERPINB3P29508 390 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 COX16Q9P0S2 106 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 APOBEC2Q9Y235 224 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 TSC22D2O75157 780 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 DEFA1P59665 94 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 DEFA3P59666 94 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 SRRM1Q8IYB3 904 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 FAM161BQ96MY7 647 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 UBN1Q9NPG3 1134 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 NRBP1Q9UHY1 535 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 KPNA2P52292 529 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 SPARCL1Q14515 664 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 MRPL40Q9NQ50 206 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 PGRMC1O00264 195 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 MOCS3O95396 460 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 GSNP06396 782 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 PDCLQ13371 301 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 PARD3BQ8TEW8 1205 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 CCDC195A0A1B0GUA6 201 aa16.51■□□□□ 0.23
GTF3C4-201ENST00000372146 AFPP02771 609 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms