RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 PPP1R11O60927 126 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 F2P00734 622 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 PTGISQ16647 500 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 PNMA1Q8ND90 353 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 AFAP1L1Q8TED9 768 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 EMID1Q96A84 441 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
EXOSC1-204ENST00000370902 ABCB11O95342 1321 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 ACTN1P12814 892 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 BFSP2Q13515 415 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 MFSD6Q6ZSS7 791 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 GDPD5Q8WTR4 605 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 MAF1Q9H063 256 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
EXOSC1-204ENST00000370902 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 KDM4AO75164 1064 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 GH1P01241 217 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 CKBP12277 381 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 SELPP16109 830 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 SDSP20132 328 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 PLA2G5P39877 138 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 HSD17B4P51659 736 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 SEPT14Q6ZU15 432 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 ESR2Q92731 530 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 MTMR8Q96EF0 704 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 LNPKQ9C0E8 428 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 CD320Q9NPF0 282 aa12.93□□□□□ -0.34
EXOSC1-204ENST00000370902 B4E1Z4 1266 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 GJB5O95377 273 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 HOXC8P31273 242 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 CNKSR3Q6P9H4 555 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 PLEKHM2Q8IWE5 1019 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 STAG2Q8N3U4 1231 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 RETREG2Q8NC44 543 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 NSUN6Q8TEA1 469 aaKnown RBP12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 RMDN3Q96TC7 470 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 FTOQ9C0B1 505 aaKnown RBP eCLIP12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 OSBPL3Q9H4L5 887 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 EPHX3Q9H6B9 360 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 PXMP2Q9NR77 195 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 COG5Q9UP83 839 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 WDFY4Q6ZS81 3184 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 TRIOO75962 3097 aa12.92□□□□□ -0.34
EXOSC1-204ENST00000370902 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 PSEN2P49810 448 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 MFSD10Q14728 455 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 SEC23AQ15436 765 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 STXBP2Q15833 593 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 IWS1Q96ST2 819 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 MPHOSPH6Q99547 160 aaKnown RBP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
EXOSC1-204ENST00000370902 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 NR3C2P08235 984 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 ERVK-21P61565 698 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 SP2Q02086 613 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 PTK7Q13308 1070 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 SKIV2LQ15477 1246 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 DGKDQ16760 1214 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 AAK1Q2M2I8 961 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 ZNF618Q5T7W0 954 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 C16orf70Q9BSU1 422 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 LRFN3Q9BTN0 628 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 NOD1Q9Y239 953 aa12.9□□□□□ -0.34
EXOSC1-204ENST00000370902 MUC6Q6W4X9 2439 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms