RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 IQCF3P0C7M6 154 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 ANTXR2P58335 489 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 RAB30Q15771 203 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 STXBP2Q15833 593 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 CCDC85BQ15834 202 aaPredicted RBP15.33■□□□□ 0.04
RPF1-201ENST00000370654 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 ARHGEF16Q5VV41 709 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 MCF2L2Q86YR7 1114 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 RPUSD2Q8IZ73 545 aaKnown RBP15.33■□□□□ 0.04
RPF1-201ENST00000370654 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
RPF1-201ENST00000370654 PIGSQ96S52 555 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 MPHOSPH6Q99547 160 aaKnown RBP15.33■□□□□ 0.04
RPF1-201ENST00000370654 AMNQ9BXJ7 453 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 BCAS3Q9H6U6 928 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 MSRAQ9UJ68 235 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 SLC4A7Q9Y6M7 1214 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 BAZ2BQ9UIF8 2168 aaKnown RBP15.32■□□□□ 0.04
RPF1-201ENST00000370654 RAD50Q92878 1312 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 CHD7Q9P2D1 2997 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 RFXAPO00287 272 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 KPNA6O60684 536 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 GHRHRQ02643 423 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 HIC1Q14526 733 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 GRM4Q14833 912 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
RPF1-201ENST00000370654 HOMER1Q86YM7 354 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
RPF1-201ENST00000370654 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 B4DLN1 442 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 E7EWF7 191 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 ZBTB5O15062 677 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 MYCLP12524 364 aaPredicted RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 ATP2A2P16615 1042 aaKnown RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 ZNF200P98182 395 aaPredicted RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 SP2Q02086 613 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 PTGISQ16647 500 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 SPRED2Q7Z698 418 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 TMCO2Q7Z6W1 182 aaPredicted RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 WNT8BQ93098 351 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 MTIF3Q9H2K0 278 aaKnown RBP15.31■□□□□ 0.04
RPF1-201ENST00000370654 RIOX1Q9H6W3 641 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 SLC28A3Q9HAS3 691 aa15.31■□□□□ 0.04
RPF1-201ENST00000370654 TANC1Q9C0D5 1861 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 EPOPA6NHQ4 379 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
RPF1-201ENST00000370654 SGSM2O43147 1006 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
RPF1-201ENST00000370654 IGFBP4P22692 258 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 PTPN11Q06124 597 aaPredicted RBP15.3■□□□□ 0.04
RPF1-201ENST00000370654 TROAPQ12815 778 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 PIBF1Q8WXW3 757 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 GAS2L1Q99501 681 aaPredicted RBP15.3■□□□□ 0.04
RPF1-201ENST00000370654 ALG1Q9BT22 464 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 MAF1Q9H063 256 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 CERS4Q9HA82 394 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
RPF1-201ENST00000370654 MYH7BA7E2Y1 1941 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 PTPRSQ13332 1948 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 CA3P07451 260 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 PSEN2P49810 448 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 PGM5Q15124 567 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 PPP2R2DQ66LE6 453 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 SESTD1Q86VW0 696 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 SKAP1Q86WV1 359 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 IGDCC4Q8TDY8 1250 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 EMID1Q96A84 441 aaPredicted RBP15.29■□□□□ 0.04
RPF1-201ENST00000370654 MYL10Q9BUA6 226 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 TELO2Q9Y4R8 837 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 MRVI1Q9Y6F6 885 aa15.29■□□□□ 0.04
RPF1-201ENST00000370654 HAS3O00219 553 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 PFKMP08237 780 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
RPF1-201ENST00000370654 MFSD10Q14728 455 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 DGKDQ16760 1214 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 HSDL1Q3SXM5 330 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 KRT40Q6A162 431 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 TRAF7Q6Q0C0 670 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 VSIG10LQ86VR7 867 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 FCHSD1Q86WN1 690 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 MB21D2Q8IYB1 491 aaPredicted RBP15.28■□□□□ 0.04
RPF1-201ENST00000370654 FTOQ9C0B1 505 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPF1-201ENST00000370654 GTF2IRD1Q9UHL9 959 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 NOD1Q9Y239 953 aa15.28■□□□□ 0.04
RPF1-201ENST00000370654 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
RPF1-201ENST00000370654 NBNO60934 754 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 HOXD8P13378 290 aaPredicted RBP15.27■□□□□ 0.04
RPF1-201ENST00000370654 RFC2P35250 354 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 TRDNQ13061 729 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 BFSP2Q13515 415 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 WTAPQ15007 396 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 KIAA0753Q2KHM9 967 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 TRIM71Q2Q1W2 868 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms