RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 UQCRFS1P1P0C7P4 283 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 HSD3B2P26439 372 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 KCNJ4P48050 445 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 RASGRF1Q13972 1273 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 C15orf52Q6ZUT6 534 aaKnown RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 RPUSD2Q8IZ73 545 aaKnown RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 CNTROBQ8N137 903 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 TMEM130Q8N3G9 435 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 TMEM102Q8N9M5 508 aaPredicted RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 UBL7Q96S82 380 aaPredicted RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 ZNF408Q9H9D4 720 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 KANSL2Q9H9L4 492 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 PIH1D3Q9NQM4 214 aaKnown RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 PAG1Q9NWQ8 432 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 KIF13BQ9NQT8 1826 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 LRRC37AA6NMS7 1700 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 LTBP1Q14766 1721 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 SOX1O00570 391 aaPredicted RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 UFL1O94874 794 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 HIBADHP31937 336 aaKnown RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 TGFB2P61812 414 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 ZMYM1Q5SVZ6 1142 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 SOGA3Q5TF21 947 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 ERMP1Q7Z2K6 904 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 VN1R5Q7Z5H4 357 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 VPS37DQ86XT2 251 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 SPATA5Q8NB90 893 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 BSNDQ8WZ55 320 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 GPRASP2Q96D09 838 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 RNPC3Q96LT9 517 aaKnown RBP4.26□□□□□ -1.73
MCF2-202ENST00000370573 SOX13Q9UN79 622 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 COL1A1P02452 1464 aaPredicted RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 XRCC5P13010 732 aaKnown RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 NMIQ13287 307 aaPredicted RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 DPP8Q6V1X1 898 aaPredicted RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 TTLL6Q8N841 843 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 KBTBD3Q8NAB2 608 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 KLHL23Q8NBE8 558 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 TDRD7Q8NHU6 1098 aaKnown RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 FAM227BQ96M60 508 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 C12orf49Q9H741 205 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 SPON1Q9HCB6 807 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 CD2APQ9Y5K6 639 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 SNED1Q8TER0 1413 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 DUOX1Q9NRD9 1551 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 CACNA1SQ13698 1873 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 AK9Q5TCS8 1911 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 MYO5AQ9Y4I1 1855 aaKnown RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 A0A0D9SFI3 127 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 ETFBP38117 255 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 IKBKEQ14164 716 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 TAF1CQ15572 869 aaPredicted RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 SPRED3Q2MJR0 410 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 CAVIN4Q5BKX8 364 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 CWC27Q6UX04 472 aaKnown RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 KIAA1211Q6ZU35 1233 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 NLGN2Q8NFZ4 835 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 STAG1Q8WVM7 1258 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 SEC62Q99442 399 aaKnown RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 FSD1Q9BTV5 496 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 RTFDC1Q9BY42 306 aaPredicted RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 CD209Q9NNX6 404 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 GNL3LQ9NVN8 582 aaKnown RBP4.25□□□□□ -1.73
MCF2-202ENST00000370573 COL4A3BPQ9Y5P4 624 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 MRVI1Q9Y6F6 885 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 DLEC1Q9Y238 1755 aa4.25□□□□□ -1.73
MCF2-202ENST00000370573 A0A1W2PP55 124 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 RNF113AO15541 343 aaKnown RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 SGSM2O43147 1006 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 H2AFB1P0C5Y9 115 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 H2AFB2P0C5Z0 115 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 IL1R1P14778 569 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 GRIA4P48058 902 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 FILIP1Q7Z7B0 1213 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 USP26Q9BXU7 913 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 NPHS2Q9NP85 383 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 PCDH12Q9NPG4 1184 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 KBTBD4Q9NVX7 518 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 PIM2Q9P1W9 311 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 DENND2AQ9ULE3 1009 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 JAG2Q9Y219 1238 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 MED23Q9ULK4 1368 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 CHD4Q14839 1912 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 SCO2A0A1W2PP80 73 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 TCRBV5S4A2TA0A5A2 114 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 FAM221BA6H8Z2 402 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 PTH1RQ03431 593 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 C19orf57Q0VDD7 668 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 CHAF1AQ13111 956 aaPredicted RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 DALRD3Q5D0E6 543 aaKnown RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 PRR23CQ6ZRP0 262 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 ZNF804AQ7Z570 1209 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 ZNF589Q86UQ0 364 aaPredicted RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 Q8N3U1 123 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 RASGRP4Q8TDF6 673 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 ZNF384Q8TF68 577 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 OSBP2Q969R2 916 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 CCDC74AQ96AQ1 378 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 MRFAP1L1Q96HT8 127 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms