RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PYCARDQ9ULZ3 195 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 A2ML1A8K2U0 1454 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 VPS41P49754 854 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 PPP2R5CQ13362 524 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 MAN2A1Q16706 1144 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 DPP9Q86TI2 863 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 SEPT12Q8IYM1 358 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 STRBPQ96SI9 672 aaKnown RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 BRIP1Q9BX63 1249 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 KMT5AQ9NQR1 393 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 MAN1A1P33908 653 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 CDC37Q16543 378 aaPredicted RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 EPHA10Q5JZY3 1008 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 SDCCAG8Q86SQ7 713 aaPredicted RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 RSRC1Q96IZ7 334 aaKnown RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 ADD3Q9UEY8 706 aaKnown RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 MEIS1O00470 390 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 UBE2SQ16763 222 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 STX2P32856 288 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 TSC1Q92574 1164 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 TRPM1Q7Z4N2 1603 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 GOLGA8FQ08AF8 430 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 GOLGA8DPQ0D2H9 430 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 RWDD2AQ9UIY3 292 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 ARHGAP25P42331 645 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 EHHADHQ08426 723 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 PCDHB4Q9Y5E5 795 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 RETREG2Q8NC44 543 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 JPH2Q9BR39 696 aaPredicted RBP21.46■■□□□ 1.03
LMO4-202ENST00000370544 NOL3O60936 208 aaKnown RBP21.46■■□□□ 1.03
LMO4-202ENST00000370544 GLI2P10070 1586 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 PDZD4Q76G19 769 aaPredicted RBP21.46■■□□□ 1.03
LMO4-202ENST00000370544 AIFM3Q96NN9 605 aa21.46■■□□□ 1.03
LMO4-202ENST00000370544 PNMA6FA0A0J9YX94 578 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 GOLGA8KD6RF30 607 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 TLR3O15455 904 aaKnown RBP21.45■■□□□ 1.02
LMO4-202ENST00000370544 CDC25AP30304 524 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 ARHGEF2Q92974 986 aaKnown RBP21.45■■□□□ 1.02
LMO4-202ENST00000370544 FAM193BQ96PV7 902 aaPredicted RBP21.45■■□□□ 1.02
LMO4-202ENST00000370544 A0A087WWV3 80 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 FKBP3Q00688 224 aaKnown RBP21.45■■□□□ 1.02
LMO4-202ENST00000370544 TYW1Q9NV66 732 aaKnown RBP21.45■■□□□ 1.02
LMO4-202ENST00000370544 RNF8O76064 485 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 ATF2P15336 505 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 TMEM206Q9H813 350 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 DISC1Q9NRI5 854 aa21.45■■□□□ 1.02
LMO4-202ENST00000370544 BFSP1Q12934 665 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 STAG1Q8WVM7 1258 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 CEP170P1Q96L14 293 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 AKT3Q9Y243 479 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 KIF11P52732 1056 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 TBC1D10BQ4KMP7 808 aaPredicted RBP21.44■■□□□ 1.02
LMO4-202ENST00000370544 CCDC13Q8IYE1 715 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 CDHR1Q96JP9 859 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 CLIC2O15247 247 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 PLEKHA8P1O95397 391 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 PLCG1P19174 1290 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 MIGA2Q7L4E1 593 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 ANKRD36BP1Q96IX9 119 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 GBP1P32455 592 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 NT5C2P49902 561 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 SF3A3Q12874 501 aaKnown RBP eCLIP21.44■■□□□ 1.02
LMO4-202ENST00000370544 IFRD2Q12894 506 aaPredicted RBP21.44■■□□□ 1.02
LMO4-202ENST00000370544 KAZNQ674X7 775 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 CACNA2D3Q8IZS8 1091 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 MASTLQ96GX5 879 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 APOL6Q9BWW8 343 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 SEPT10Q9P0V9 454 aa21.44■■□□□ 1.02
LMO4-202ENST00000370544 RNF40O75150 1001 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 ARHGAP24Q8N264 748 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 SH3RF3Q8TEJ3 882 aaPredicted RBP21.43■■□□□ 1.02
LMO4-202ENST00000370544 PAGE5Q96GU1 130 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 FAM160B2Q86V87 743 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 SLC35F6Q8N357 371 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 THAP12O43422 761 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 MESDQ14696 234 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 PTPN21Q16825 1174 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 ABL1P00519 1130 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 SEPT2Q15019 361 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 DGKHQ86XP1 1220 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 FOXP4Q8IVH2 680 aaPredicted RBP21.43■■□□□ 1.02
LMO4-202ENST00000370544 BBOF1Q8ND07 529 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 GSDMBQ8TAX9 411 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 PASKQ96RG2 1323 aa21.43■■□□□ 1.02
LMO4-202ENST00000370544 ANKRD20A3Q5VUR7 823 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 ENOX1Q8TC92 643 aaKnown RBP21.42■■□□□ 1.02
LMO4-202ENST00000370544 PCIF1Q9H4Z3 704 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 SH3GLB2Q9NR46 395 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 THAP9Q9H5L6 903 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 INO80B-WBP1J3KQ70 363 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 PLA2G4BP0C869 781 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 NAA35Q5VZE5 725 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 INO80BQ9C086 356 aaPredicted RBP21.42■■□□□ 1.02
LMO4-202ENST00000370544 HOMER3Q9NSC5 361 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 MYO1FO00160 1098 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 PSMD2Q13200 908 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms