RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CFAP74Q9C0B2 1584 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ARHGAP42A6NI28 874 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 XPOTO43592 962 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ACTN1P12814 892 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ATF2P15336 505 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 GBP1P32455 592 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 YWHAGP61981 247 aaKnown RBP eCLIP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CDC37Q16543 378 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 GPATCH4Q5T3I0 446 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PDXDC2PQ6P474 469 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 GDAP1Q8TB36 358 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 GRK7Q8WTQ7 553 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 LARP4BQ92615 738 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 KANSL2Q9H9L4 492 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 RNF181Q9P0P0 153 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ANGPTL3Q9Y5C1 460 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 SH3RF3Q8TEJ3 882 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CCDC17Q96LX7 622 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PALLDQ8WX93 1383 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ELF1P32519 619 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 JADE1Q6IE81 842 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ZNF668Q96K58 619 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 IPO11Q9UI26 975 aaKnown RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 A0A087WWV3 80 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 POC1B-GALNT4F8VUJ3 575 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GALNT17Q6IS24 598 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 NT5C1BQ96P26 610 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GCNAQ96QF7 691 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ACCSQ96QU6 501 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 LONP1P36776 959 aaKnown RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 SEPT6Q14141 434 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ANKRD20A3Q5VUR7 823 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 DSTYKQ6XUX3 929 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 RUFY4Q6ZNE9 571 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 RTKN2Q8IZC4 609 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 OR8K1Q8NGG5 319 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 NLRP1Q9C000 1473 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 PFDN6O15212 129 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 FOSP01100 380 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 CLCN1P35523 988 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 CDO1Q16878 200 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 PPP4R4Q6NUP7 873 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 P3H4Q92791 437 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 EFCAB6Q5THR3 1501 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ABCC4O15439 1325 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 AFF2P51816 1311 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 MASTLQ96GX5 879 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ZSWIM6Q9HCJ5 1215 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ZHX2Q9Y6X8 837 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GH2P01242 217 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 ADD2P35612 726 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GRAPQ13588 217 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 KRT33BQ14525 404 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 HLFQ16534 295 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 CACNA2D3Q8IZS8 1091 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 GRAPLQ8TC17 118 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
ABCA4-201ENST00000370225 UBE2TQ9NPD8 197 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-201ENST00000370225 PSAPP07602 524 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 ZNF18P17022 549 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 EHHADHQ08426 723 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 FAM83BQ5T0W9 1011 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 SPDYE1Q8NFV5 336 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 CACTINQ8WUQ7 758 aaKnown RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 RAVER2Q9HCJ3 691 aaKnown RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 FAM135BQ49AJ0 1406 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 CIAO1O76071 339 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 PSMC2P35998 433 aaKnown RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 PKP1Q13835 747 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 TTC19Q6DKK2 380 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 ATP6V1E2Q96A05 226 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 WRNIP1Q96S55 665 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 CASQ2O14958 399 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 CDK8P49336 464 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 MTMR3Q13615 1198 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 TDRD3Q9H7E2 651 aaKnown RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 LMBRD1Q9NUN5 540 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 SLC12A6Q9UHW9 1150 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 ECE2O60344 883 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 ATP1A2P50993 1020 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 RNF207Q6ZRF8 634 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 KCTD6Q8NC69 237 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 MTRQ99707 1265 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 LRRC4Q9HBW1 653 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1381.6 ms