RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 KIAA0355O15063 1070 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 CDC27P30260 824 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 CPT1AP50416 773 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 PURAQ00577 322 aaKnown RBP16.7■□□□□ 0.26
SSR4-203ENST00000370086 APOBRQ0VD83 1088 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 FUT2Q10981 343 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 ITGA7Q13683 1181 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 RTN1Q16799 776 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 TMEM39AQ9NV64 488 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 SZT2Q5T011 3432 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 MROH7Q68CQ1 1323 aa16.7■□□□□ 0.26
SSR4-203ENST00000370086 A6NJR5 290 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 GOLGA8AA7E2F4 631 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 GOLGA8BA8MQT2 603 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 MYL3P08590 195 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 CASTP20810 708 aaKnown RBP16.69■□□□□ 0.26
SSR4-203ENST00000370086 FGD1P98174 961 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 TDHQ8IZJ6 230 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 BRF1Q92994 677 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 AGXT2Q9BYV1 514 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
SSR4-203ENST00000370086 DDX41Q9UJV9 622 aaKnown RBP16.69■□□□□ 0.26
SSR4-203ENST00000370086 PIK3CDO00329 1044 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 SOX1O00570 391 aaPredicted RBP16.68■□□□□ 0.26
SSR4-203ENST00000370086 GH1P01241 217 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 CD4P01730 458 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 PSMA5P28066 241 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 CCND2P30279 289 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 RCAN1P53805 252 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 MRPS9P82933 396 aaKnown RBP16.68■□□□□ 0.26
SSR4-203ENST00000370086 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
SSR4-203ENST00000370086 TBX21Q9UL17 535 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 NAP1L2Q9ULW6 460 aaPredicted RBP16.68■□□□□ 0.26
SSR4-203ENST00000370086 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
SSR4-203ENST00000370086 RAG1P15918 1043 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
SSR4-203ENST00000370086 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 AFG1LQ8WV93 481 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 CUL5Q93034 780 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
SSR4-203ENST00000370086 PSTPIP2Q9H939 334 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
SSR4-203ENST00000370086 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
SSR4-203ENST00000370086 NID2Q14112 1375 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 TLR3O15455 904 aaKnown RBP16.66■□□□□ 0.26
SSR4-203ENST00000370086 KPNA6O60684 536 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 MMP3P08254 477 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 METAP2P50579 478 aaKnown RBP eCLIP16.66■□□□□ 0.263e-6■■■■□ 21.8
SSR4-203ENST00000370086 SP2Q02086 613 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 UBE2SQ16763 222 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
SSR4-203ENST00000370086 TYW1BQ6NUM6 668 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
SSR4-203ENST00000370086 SORBS3O60504 671 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 B4GALT4O60513 344 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 TIMP1P01033 207 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 EPHB4P54760 987 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
SSR4-203ENST00000370086 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 DHX37Q8IY37 1157 aaKnown RBP16.65■□□□□ 0.26
SSR4-203ENST00000370086 EMID1Q96A84 441 aaPredicted RBP16.65■□□□□ 0.26
SSR4-203ENST00000370086 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 TRPV6Q9H1D0 765 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 RTEL1Q9NZ71 1219 aa16.65■□□□□ 0.26
SSR4-203ENST00000370086 LAMA2P24043 3122 aaKnown RBP16.64■□□□□ 0.25
SSR4-203ENST00000370086 EVCP57679 992 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 SEMA3FQ13275 785 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 SHHQ15465 462 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 LRIT3Q3SXY7 679 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 SEZ6LQ9BYH1 1024 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
SSR4-203ENST00000370086 BCAS3Q9H6U6 928 aa16.64■□□□□ 0.25
SSR4-203ENST00000370086 STXBP3O00186 592 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 STAM2O75886 525 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 GGPS1O95749 300 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 TGFB3P10600 412 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 UBA1P22314 1058 aaKnown RBP16.63■□□□□ 0.25
SSR4-203ENST00000370086 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
SSR4-203ENST00000370086 ICAM3P32942 547 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 NAPAP54920 295 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 LAMC2Q13753 1193 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
SSR4-203ENST00000370086 MYSM1Q5VVJ2 828 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 PPTC7Q8NI37 304 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 KAT2BQ92831 832 aa16.63■□□□□ 0.25
SSR4-203ENST00000370086 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
SSR4-203ENST00000370086 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
SSR4-203ENST00000370086 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms