RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 DISC1Q9NRI5 854 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 ARFGEF1Q9Y6D6 1849 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 BMP6P22004 513 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 ADKP55263 362 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 TRAF1Q13077 416 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 CALCRLQ16602 461 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 BTNL9Q6UXG8 535 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 GJA3Q9Y6H8 435 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 CAP2P40123 477 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 UBASH3AP57075 661 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 TRIM65Q6PJ69 517 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 SPICE1Q8N0Z3 855 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 RAB34Q9BZG1 259 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 ECE1P42892 770 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 RASA3Q14644 834 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 FBXW10Q5XX13 1052 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 TTC19Q6DKK2 380 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 CABP7Q86V35 215 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 STAMQ92783 540 aa11.14□□□□□ -0.63
PRPF38B-203ENST00000370025 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 ASNSP08243 561 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 TECP42680 631 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 TXKP42681 527 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 GMPSP49915 693 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 STAT2P52630 851 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 RASSF7Q02833 373 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 PPP4R3AQ6IN85 833 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 ACER1Q8TDN7 264 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CXorf56Q9H5V9 222 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 PP2D1A8MPX8 630 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 MARCH6O60337 910 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 IVLP07476 585 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 GCFC2P16383 781 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 ERCC5P28715 1186 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 FANCCQ00597 558 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CDAN1Q8IWY9 1227 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CHURC1Q8WUH1 139 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 RIN2Q8WYP3 895 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CUEDC2Q9H467 287 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CASP1P29466 404 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 PTGER2P43116 358 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CNPY4Q8N129 248 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 ENOX1Q8TC92 643 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 PPM1EQ8WY54 764 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CALML4Q96GE6 196 aa11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 CNOT7Q9UIV1 285 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 FZD9O00144 591 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 TDP2O95551 362 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 TOGARAM2Q6ZUX3 1019 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 MTMR9Q96QG7 549 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 BLZF1Q9H2G9 400 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 VCPKMTQ9H867 229 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 FAM204AQ9H8W3 233 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 MAGEF1Q9HAY2 307 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 PGAP2Q9UHJ9 254 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 MYL1P05976 194 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 MAP2K2P36507 400 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 SNAP25P60880 206 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USH1GQ495M9 461 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 ANKRD20A12PQ8NF67 263 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 ABCB6Q9NP58 842 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 FANCLQ9NW38 375 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 LRWD1Q9UFC0 647 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 USP11P51784 963 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 CUL4BQ13620 913 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 FAM83BQ5T0W9 1011 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 FKBP15Q5T1M5 1219 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms