RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 AENQ8WTP8 325 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CTNNBL1Q8WYA6 563 aaPredicted RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 MTRQ99707 1265 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 PPP1R12CQ9BZL4 782 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 ARHGAP20Q9P2F6 1191 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 FBXL5Q9UKA1 691 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 NKRFO15226 690 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 TSPY3P0CV98 308 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 TSPY8P0CW00 308 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CCNE1P24864 410 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CALML3P27482 149 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 PBX1P40424 430 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 KIF2BQ8N4N8 673 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 GJA10Q969M2 543 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 LRRC45Q96CN5 670 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CELF4Q9BZC1 486 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 ARPP21Q9UBL0 812 aaPredicted RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 ITIH6Q6UXX5 1313 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 ANO9A1A5B4 782 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 DONSONQ9NYP3 566 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 SEC63Q9UGP8 760 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 FGFR1OPO95684 399 aaKnown RBP11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 GNAT2P19087 354 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 IRF2BP1Q8IU81 584 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 PACSIN1Q9BY11 444 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 SRGNP10124 158 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 KLRC1P26715 233 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 CNNM4Q6P4Q7 775 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 DZIP1Q86YF9 867 aaKnown RBP11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 STAG2Q8N3U4 1231 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 ZNF263O14978 683 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 ADAMTS3O15072 1205 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 VPS41P49754 854 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 SESN3P58005 492 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 VWA3BQ502W6 1294 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 HERC4Q5GLZ8 1057 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 SEC16BQ96JE7 1060 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 RFX7Q2KHR2 1363 aa11.44□□□□□ -0.58
PRPF38B-201ENST00000370021 GSTTP1A0A1W2PQM5 241 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 PRPF3O43395 683 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 ERFP50548 548 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 ZNF211Q13398 564 aaPredicted RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 ASIC2Q16515 512 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 SNX29Q8TEQ0 813 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 DYNLL2Q96FJ2 89 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 PHF20Q9BVI0 1012 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 THAP9Q9H5L6 903 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 RBM28Q9NW13 759 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 PNMA2Q9UL42 364 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 TACC3Q9Y6A5 838 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 PCK1P35558 622 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 PLS1Q14651 629 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 RETREG2Q8NC44 543 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 CCDC197Q8NCU1 140 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 U2AF1L4Q8WU68 220 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 DNAJC7Q99615 494 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 PTPN22Q9Y2R2 807 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 UTP11Q9Y3A2 253 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 JCADQ9P266 1359 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 STK36Q9NRP7 1315 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 A6NNZ2 444 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 RGS16O15492 202 aaPredicted RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 DIAPH2O60879 1101 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 FAM107AO95990 144 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 NEFHP12036 1026 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 LONP1P36776 959 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 QPCTQ16769 361 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 TUBB8Q3ZCM7 444 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 SALL4Q9UJQ4 1053 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 TPX2Q9ULW0 747 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 BCS1LQ9Y276 419 aa11.43□□□□□ -0.58
PRPF38B-201ENST00000370021 ADAMTS7Q9UKP4 1686 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 FAM237AA0A1B0GTK4 181 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 CALM1P0DP23 149 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 CALM2P0DP24 149 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 CALM3P0DP25 149 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 PKN1Q16512 942 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 FMNL3Q8IVF7 1028 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 MMGT1Q8N4V1 131 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 GDAP1Q8TB36 358 aa11.42□□□□□ -0.58
PRPF38B-201ENST00000370021 NSMCE1Q8WV22 266 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms