RNA–Protein interactions for RNA: ENST00000369957.5

MECP2-202, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-202ENST00000369957 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
MECP2-202ENST00000369957 ZSWIM5Q9P217 1185 aa10.78□□□□□ -0.68
MECP2-202ENST00000369957 COL4A4P53420 1690 aaPredicted RBP10.78□□□□□ -0.68
MECP2-202ENST00000369957 TANC1Q9C0D5 1861 aa10.78□□□□□ -0.68
MECP2-202ENST00000369957 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
MECP2-202ENST00000369957 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.69
MECP2-202ENST00000369957 ARIH2O95376 493 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 HMGB1P09429 215 aaKnown RBP10.77□□□□□ -0.69
MECP2-202ENST00000369957 TOP1P11387 765 aaKnown RBP10.77□□□□□ -0.69
MECP2-202ENST00000369957 MCM5P33992 734 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 AAK1Q2M2I8 961 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 TSGA10IPQ3SY00 556 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 FAM47CQ5HY64 1035 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 BTNL9Q6UXG8 535 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 DGKHQ86XP1 1220 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 SLC9A7Q96T83 725 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 ZKSCAN3Q9BRR0 538 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 KAT14Q9H8E8 782 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
MECP2-202ENST00000369957 TRIP12Q14669 1992 aaPredicted RBP10.77□□□□□ -0.69
MECP2-202ENST00000369957 PTPDC1A2A3K4 754 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 FAM86C2PA6NEL3 165 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 A6NJR5 290 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 GTPBP6O43824 516 aaPredicted RBP10.76□□□□□ -0.69
MECP2-202ENST00000369957 EDNRBP24530 442 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 CALML3P27482 149 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 CPT1AP50416 773 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 C8orf34Q49A92 452 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 IFIT1BQ5T764 474 aaKnown RBP10.76□□□□□ -0.69
MECP2-202ENST00000369957 SYDE2Q5VT97 1194 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 NFRKBQ6P4R8 1299 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 PHOSPHO2Q8TCD6 241 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 DCAF4Q8WV16 495 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 DHX38Q92620 1227 aaKnown RBP10.76□□□□□ -0.69
MECP2-202ENST00000369957 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 TMEM47Q9BQJ4 181 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 MTA3Q9BTC8 594 aa10.76□□□□□ -0.69
MECP2-202ENST00000369957 FTOQ9C0B1 505 aaKnown RBP eCLIP10.76□□□□□ -0.69
MECP2-202ENST00000369957 PRC1O43663 620 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 ACTN1P12814 892 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 RFC2P35250 354 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 RPS6P62753 249 aaKnown RBP10.75□□□□□ -0.69
MECP2-202ENST00000369957 DEFB103AP81534 67 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 FGD1P98174 961 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 WTAPQ15007 396 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
MECP2-202ENST00000369957 BLOC1S2Q6QNY1 142 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 NFXL1Q6ZNB6 911 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 CYB5R4Q7L1T6 521 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 MB21D2Q8IYB1 491 aaPredicted RBP10.75□□□□□ -0.69
MECP2-202ENST00000369957 RASEFQ8IZ41 740 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 TMTC2Q8N394 836 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 GDPD5Q8WTR4 605 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 KCNB2Q92953 911 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 HLA-CQ95604 372 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
MECP2-202ENST00000369957 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
MECP2-202ENST00000369957 ADD3Q9UEY8 706 aaKnown RBP10.75□□□□□ -0.69
MECP2-202ENST00000369957 COG5Q9UP83 839 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 SNX14Q9Y5W7 946 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
MECP2-202ENST00000369957 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 CCDC69A6NI79 296 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 TXNP10599 105 aaKnown RBP10.74□□□□□ -0.69
MECP2-202ENST00000369957 PDHBP11177 359 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 CHMP4BP1P59074 171 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 ANAPC15P60006 121 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 WDR5P61964 334 aaKnown RBP10.74□□□□□ -0.69
MECP2-202ENST00000369957 PDE4DQ08499 809 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 PPP2R5BQ15173 497 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
MECP2-202ENST00000369957 CCDC62Q6P9F0 684 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 SYNE3Q6ZMZ3 975 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 RNF207Q6ZRF8 634 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 DHX32Q7L7V1 743 aaKnown RBP10.74□□□□□ -0.69
MECP2-202ENST00000369957 CHST3Q7LGC8 479 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
MECP2-202ENST00000369957 RETREG2Q8NC44 543 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 TBC1D5Q92609 795 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 KAT2BQ92831 832 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 BRWD1Q9NSI6 2320 aa10.74□□□□□ -0.69
MECP2-202ENST00000369957 LAMA4Q16363 1823 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 NKRFO15226 690 aaKnown RBP eCLIP10.73□□□□□ -0.69
MECP2-202ENST00000369957 NBNO60934 754 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 PTPN11Q06124 597 aaPredicted RBP10.73□□□□□ -0.69
MECP2-202ENST00000369957 PTGISQ16647 500 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 LY6KQ17RY6 165 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 ADCK5Q3MIX3 580 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 TMEM31Q5JXX7 168 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 TRAF7Q6Q0C0 670 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 CATIPQ7Z7H3 387 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 SCFD2Q8WU76 684 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 AFG1LQ8WV93 481 aa10.73□□□□□ -0.69
MECP2-202ENST00000369957 WNT8BQ93098 351 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms