RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PRPF40AO75400 957 aaKnown RBP7.82□□□□□ -1.16
CSDE1-204ENST00000369530 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 TUBB4AP04350 444 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 ITGB8P26012 769 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 CCND3P30281 292 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-204ENST00000369530 CDC25BP30305 580 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 ICAM3P32942 547 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 GPS2Q13227 327 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 GORABQ5T7V8 394 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 CWC27Q6UX04 472 aaKnown RBP7.82□□□□□ -1.16
CSDE1-204ENST00000369530 TATDN2Q93075 761 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 FAXDC2Q96IV6 333 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 ST7Q9NRC1 585 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 PRR12Q9ULL5 1215 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 ST18O60284 1047 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 ATG7O95352 703 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 MTA1Q13330 715 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 GPR153Q6NV75 609 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 C10orf67Q8IYJ2 551 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 PTPRDP23468 1912 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 NEK4P51957 841 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 KIF2AO00139 706 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-204ENST00000369530 ACTN2P35609 894 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 DNAJC21Q5F1R6 531 aaKnown RBP7.81□□□□□ -1.16
CSDE1-204ENST00000369530 GPRC5AQ8NFJ5 357 aa7.81□□□□□ -1.16
CSDE1-204ENST00000369530 ZSCAN10Q96SZ4 725 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-204ENST00000369530 RC3H2Q9HBD1 1191 aaKnown RBP7.81□□□□□ -1.16
CSDE1-204ENST00000369530 MTCL1Q9Y4B5 1905 aaKnown RBP7.81□□□□□ -1.16
CSDE1-204ENST00000369530 A0A1W2PPC1 479 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 HIP1O00291 1037 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 AP5Z1O43299 807 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 SLC25A27O95847 323 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 MCCD1P59942 119 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 FOXD4L6Q3SYB3 417 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 CCDC183Q5T5S1 534 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 FOXD4L3Q6VB84 417 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 SMARCE1Q969G3 411 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 UNC93B1Q9H1C4 597 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 MYH9P35579 1960 aaKnown RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 TRIM75PA6NK02 468 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 RANBP6O60518 1105 aaKnown RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 CCL5P13501 91 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 FLT3LGP49771 235 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 CUL4AQ13619 759 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 EFCAB13Q8IY85 973 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 FAM177A1Q8N128 213 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 CHST13Q8NET6 341 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 ANKRD20A12PQ8NF67 263 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 SNX14Q9Y5W7 946 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 HMGCRP04035 888 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 PSMC4P43686 418 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 ICA1Q05084 483 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 TAF1CQ15572 869 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 TCTN1Q2MV58 587 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 ZNF592Q92610 1267 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 DRC1Q96MC2 740 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 TSEN34Q9BSV6 310 aaKnown RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 UPF3BQ9BZI7 483 aaKnown RBP7.8□□□□□ -1.16
CSDE1-204ENST00000369530 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
CSDE1-204ENST00000369530 GREB1Q4ZG55 1949 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 IGLV3-22A0A075B6J6 115 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 TOP1P11387 765 aaKnown RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 EN2P19622 333 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 COPB2P35606 906 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 KCNJ6P48051 423 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 SETDB1Q15047 1291 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 FAM83BQ5T0W9 1011 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 STAG2Q8N3U4 1231 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 ANKRD13CQ8N6S4 541 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 FSD1Q9BTV5 496 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 VWA8A3KMH1 1905 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 ZBTB42B2RXF5 422 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 SLU7O95391 586 aaKnown RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 INHAP05111 366 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 TNNT1P13805 278 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 TAL1P17542 331 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 TTBK2Q6IQ55 1244 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 C16orf59Q7L2K0 433 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 NEK11Q8NG66 645 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 AGBL1Q96MI9 1066 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 SLF1Q9BQI6 1058 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 HOXC10Q9NYD6 342 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 TMOD2Q9NZR1 351 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 SYNRGQ9UMZ2 1314 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 DHX15O43143 795 aaKnown RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 NEMFO60524 1076 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 HLA-DOAP06340 250 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 FCGRTP55899 365 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 CREB3L3Q68CJ9 461 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 PLEKHH3Q7Z736 793 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 SRBD1Q8N5C6 995 aaKnown RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 KAT2BQ92831 832 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 ZNF408Q9H9D4 720 aa7.79□□□□□ -1.16
CSDE1-204ENST00000369530 ZNF215Q9UL58 517 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-204ENST00000369530 ATXN2Q99700 1313 aaKnown RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 MYADML2A6NDP7 307 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 DNM1LO00429 736 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 CLCN6P51797 869 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 RBM5P52756 815 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 TFAP4Q01664 338 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms