RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 CERS5Q8N5B7 392 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 MSANTD4Q8NCY6 345 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 SYN2Q92777 582 aaPredicted RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 CNKSR1Q969H4 720 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 COA7Q96BR5 231 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 FAM20AQ96MK3 541 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 PNMA5Q96PV4 448 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 AMNQ9BXJ7 453 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 BLOC1S4Q9NUP1 217 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM3-209ENST00000368527 FAM184BQ9ULE4 1060 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 V9GYY5 206 aaPredicted RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 TRIM49BA6NDI0 452 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 MYMKA6NI61 221 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 H0YIN7 160 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 EIF3JO75822 258 aaKnown RBP11.36□□□□□ -0.59
TPM3-209ENST00000368527 TRIM37O94972 964 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 ARHGAP25P42331 645 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 SLC1A4P43007 532 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
TPM3-209ENST00000368527 FKBP3Q00688 224 aaKnown RBP11.36□□□□□ -0.59
TPM3-209ENST00000368527 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 KIAA1328Q86T90 577 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 CCDC155Q8N6L0 562 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 NDST4Q9H3R1 872 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 EHMT1Q9H9B1 1298 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 KCNMB3Q9NPA1 279 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 DDX4Q9NQI0 724 aaKnown RBP11.36□□□□□ -0.59
TPM3-209ENST00000368527 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 RAB21Q9UL25 225 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 PLAGL2Q9UPG8 496 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
TPM3-209ENST00000368527 BAZ2BQ9UIF8 2168 aaKnown RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 B4DLN1 442 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 TDP2O95551 362 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 PNMA6AP0CW24 399 aaPredicted RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 ZSCAN20P17040 1043 aaPredicted RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 MUTP22033 750 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 MMP14P50281 582 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 KIF5AQ12840 1032 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 MCM6Q14566 821 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 MAP9Q49MG5 647 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 Q4G0T1 1027 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 FAM26FQ5R3K3 315 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 ZNF772Q68DY9 489 aaPredicted RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 CC2D1AQ6P1N0 951 aaPredicted RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 SLC35F6Q8N357 371 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 KIAA0895Q8NCT3 520 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 TRIM58Q8NG06 486 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 DDX12PQ92771 950 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 CCDC42Q96M95 316 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 PLIN2Q99541 437 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 MXD3Q9BW11 206 aa11.35□□□□□ -0.59
TPM3-209ENST00000368527 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
TPM3-209ENST00000368527 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 TARSL2A2RTX5 802 aaKnown RBP11.34□□□□□ -0.59
TPM3-209ENST00000368527 F8W031 263 aaPredicted RBP11.34□□□□□ -0.59
TPM3-209ENST00000368527 FANCGO15287 622 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 SLC37A4O43826 429 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 LCA5LO95447 670 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 PRLRP16471 622 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 ANXA13P27216 316 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 VAV2P52735 878 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 ICA1Q05084 483 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 ITIH3Q06033 890 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 PTPN21Q16825 1174 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 QRICH1Q2TAL8 776 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 MIIPQ5JXC2 388 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 DACT2Q5SW24 774 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 CCDC122Q5T0U0 273 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 PAPD7Q5XG87 772 aaKnown RBP11.34□□□□□ -0.59
TPM3-209ENST00000368527 FBXO11Q86XK2 927 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 FMNL3Q8IVF7 1028 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 ACRBPQ8NEB7 543 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 NEK11Q8NG66 645 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 JAKMIP2Q96AA8 810 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 ANO3Q9BYT9 981 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 CPVLQ9H3G5 476 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 NHEJ1Q9H9Q4 299 aaPredicted RBP11.34□□□□□ -0.59
TPM3-209ENST00000368527 PANK4Q9NVE7 773 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 TMOD2Q9NZR1 351 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 RABGAP1Q9Y3P9 1069 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 DAAM1Q9Y4D1 1078 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 PCDHA1Q9Y5I3 950 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms