RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BLOC1S2Q6QNY1 142 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 Q6ZUG5 572 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 FCHSD1Q86WN1 690 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 TDHQ8IZJ6 230 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 BADQ92934 168 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 VTI1AQ96AJ9 217 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 LBHD1Q9BQE6 289 aaPredicted RBP21.88■■□□□ 1.09
CKS1B-203ENST00000368439 AGXT2Q9BYV1 514 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 RBM28Q9NW13 759 aaKnown RBP21.88■■□□□ 1.09
CKS1B-203ENST00000368439 DDX41Q9UJV9 622 aaKnown RBP21.88■■□□□ 1.09
CKS1B-203ENST00000368439 TBX21Q9UL17 535 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 SOX1O00570 391 aaPredicted RBP21.87■■□□□ 1.09
CKS1B-203ENST00000368439 CD4P01730 458 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 RPS6KB1P23443 525 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 CDC27P30260 824 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 PSMC6P62333 389 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 ARHGAP1Q07960 439 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 ITGA7Q13683 1181 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 RTN1Q16799 776 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 TMEM39AQ9NV64 488 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 POLR3EQ9NVU0 708 aa21.87■■□□□ 1.09
CKS1B-203ENST00000368439 MYCLP12524 364 aaPredicted RBP21.86■■□□□ 1.09
CKS1B-203ENST00000368439 APOBRQ0VD83 1088 aa21.86■■□□□ 1.09
CKS1B-203ENST00000368439 USP17L6PQ6QN14 398 aa21.86■■□□□ 1.09
CKS1B-203ENST00000368439 NID2Q14112 1375 aa21.86■■□□□ 1.09
CKS1B-203ENST00000368439 GH1P01241 217 aa21.85■■□□□ 1.09
CKS1B-203ENST00000368439 MRPS9P82933 396 aaKnown RBP21.85■■□□□ 1.09
CKS1B-203ENST00000368439 BRF1Q92994 677 aa21.85■■□□□ 1.09
CKS1B-203ENST00000368439 ZFP91Q96JP5 570 aaPredicted RBP21.85■■□□□ 1.09
CKS1B-203ENST00000368439 SEZ6LQ9BYH1 1024 aa21.85■■□□□ 1.09
CKS1B-203ENST00000368439 GOLGA8AA7E2F4 631 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 GOLGA8BA8MQT2 603 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 MYL3P08590 195 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 CASTP20810 708 aaKnown RBP21.84■■□□□ 1.09
CKS1B-203ENST00000368439 CCND2P30279 289 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 LRIT3Q3SXY7 679 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 AFG1LQ8WV93 481 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 GPKOWQ92917 476 aaPredicted RBP eCLIP21.84■■□□□ 1.09
CKS1B-203ENST00000368439 EMID1Q96A84 441 aaPredicted RBP21.84■■□□□ 1.09
CKS1B-203ENST00000368439 MTG1Q9BT17 334 aaPredicted RBP21.84■■□□□ 1.09
CKS1B-203ENST00000368439 ZSWIM6Q9HCJ5 1215 aa21.84■■□□□ 1.09
CKS1B-203ENST00000368439 RAG1P15918 1043 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 PSMA5P28066 241 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 EVCP57679 992 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 BRDTQ58F21 947 aaPredicted RBP21.83■■□□□ 1.09
CKS1B-203ENST00000368439 WWC2Q6AWC2 1192 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 TYW1BQ6NUM6 668 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 SMARCC2Q8TAQ2 1214 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 PSTPIP2Q9H939 334 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 MRVI1Q9Y6F6 885 aa21.83■■□□□ 1.09
CKS1B-203ENST00000368439 DOCK5Q9H7D0 1870 aa21.83■■□□□ 1.08
CKS1B-203ENST00000368439 KPNA6O60684 536 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 TIMP1P01033 207 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 MMP3P08254 477 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 ADD1P35611 737 aaKnown RBP21.82■■□□□ 1.08
CKS1B-203ENST00000368439 EPHB4P54760 987 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 FGD1P98174 961 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 SP2Q02086 613 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 RUFY3Q7L099 469 aa21.82■■□□□ 1.08
CKS1B-203ENST00000368439 V9GY48 417 aaPredicted RBP21.82■■□□□ 1.08
CKS1B-203ENST00000368439 TLR3O15455 904 aaKnown RBP21.81■■□□□ 1.08
CKS1B-203ENST00000368439 B4GALT4O60513 344 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 METAP2P50579 478 aaKnown RBP eCLIP21.81■■□□□ 1.08
CKS1B-203ENST00000368439 C9orf50Q5SZB4 431 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 KCNV1Q6PIU1 500 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 HEATR3Q7Z4Q2 680 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 CUL5Q93034 780 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 LRCH3Q96II8 777 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 INPP4AQ96PE3 977 aaPredicted RBP21.81■■□□□ 1.08
CKS1B-203ENST00000368439 TM6SF1Q9BZW5 370 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 TRPV6Q9H1D0 765 aa21.81■■□□□ 1.08
CKS1B-203ENST00000368439 LAMA2P24043 3122 aaKnown RBP21.81■■□□□ 1.08
CKS1B-203ENST00000368439 STAM2O75886 525 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 TGFB3P10600 412 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 UBA1P22314 1058 aaKnown RBP21.8■■□□□ 1.08
CKS1B-203ENST00000368439 ICAM3P32942 547 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 SEMA3FQ13275 785 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 LAMC2Q13753 1193 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 TOB2Q14106 344 aaPredicted RBP21.8■■□□□ 1.08
CKS1B-203ENST00000368439 SHHQ15465 462 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 UBE2SQ16763 222 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 NBPF20Q3BBV1 942 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 PCNX4Q63HM2 1172 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 KAT2BQ92831 832 aa21.8■■□□□ 1.08
CKS1B-203ENST00000368439 ALDH8A1Q9H2A2 487 aaPredicted RBP21.8■■□□□ 1.08
CKS1B-203ENST00000368439 STXBP3O00186 592 aa21.79■■□□□ 1.08
CKS1B-203ENST00000368439 HOXD8P13378 290 aaPredicted RBP21.79■■□□□ 1.08
CKS1B-203ENST00000368439 CELF3Q5SZQ8 465 aaKnown RBP21.79■■□□□ 1.08
CKS1B-203ENST00000368439 MFSD5Q6N075 450 aa21.79■■□□□ 1.08
CKS1B-203ENST00000368439 DHX37Q8IY37 1157 aaKnown RBP21.79■■□□□ 1.08
CKS1B-203ENST00000368439 PPTC7Q8NI37 304 aa21.79■■□□□ 1.08
CKS1B-203ENST00000368439 PPP1R13LQ8WUF5 828 aa21.79■■□□□ 1.08
CKS1B-203ENST00000368439 BCAS3Q9H6U6 928 aa21.79■■□□□ 1.08
CKS1B-203ENST00000368439 NAP1L2Q9ULW6 460 aaPredicted RBP21.79■■□□□ 1.08
CKS1B-203ENST00000368439 SPATA31C2B4DYI2 1134 aa21.78■■□□□ 1.08
CKS1B-203ENST00000368439 hCG_1984214I3L0E3 225 aa21.78■■□□□ 1.08
CKS1B-203ENST00000368439 GGPS1O95749 300 aa21.78■■□□□ 1.08
CKS1B-203ENST00000368439 FPGSQ05932 587 aa21.78■■□□□ 1.08
CKS1B-203ENST00000368439 NTRK3Q16288 839 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms