RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CYP3A7-CYP3A51PA0A087WV96 503 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 TCP10L2B9ZVM9 353 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 SLC37A4O43826 429 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 TDP2O95551 362 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 CYP3A7P24462 503 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 EPHX2P34913 555 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
USF1-202ENST00000368020 DNM2P50570 870 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 TMEM119Q4V9L6 283 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 TTI2Q6NXR4 508 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 SYT10Q6XYQ8 523 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 RETREG2Q8NC44 543 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 SNX29Q8TEQ0 813 aa15.66■□□□□ 0.1
USF1-202ENST00000368020 F5H6K3 240 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 TBX3O15119 743 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 SLC16A2P36021 539 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 UBXN1Q04323 297 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 KLRC3Q07444 240 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 GRB10Q13322 594 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 HYIQ5T013 277 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 BTNL9Q6UXG8 535 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 SH3BP5LQ7L8J4 393 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 PNMA8AQ86V59 439 aaPredicted RBP15.65■□□□□ 0.1
USF1-202ENST00000368020 CSGALNACT2Q8N6G5 542 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 RAD54LQ92698 747 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 PLIN2Q99541 437 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 NUP58Q9BVL2 599 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 ARHGEF10LQ9HCE6 1279 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 BMP2KQ9NSY1 1161 aaPredicted RBP15.65■□□□□ 0.1
USF1-202ENST00000368020 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
USF1-202ENST00000368020 PGAP2Q9UHJ9 254 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 PCDHA12Q9UN75 941 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 PPP2R3BQ9Y5P8 575 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 ABCB11O95342 1321 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 POLR2AP24928 1970 aaKnown RBP15.65■□□□□ 0.1
USF1-202ENST00000368020 POTECB2RU33 542 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 GYPCP04921 128 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 UBE2SQ16763 222 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 TSR1Q2NL82 804 aaKnown RBP15.65■□□□□ 0.1
USF1-202ENST00000368020 CYP26C1Q6V0L0 522 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 FBXO11Q86XK2 927 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 KCTD17Q8N5Z5 321 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 MBOAT7Q96N66 472 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 CSRNP1Q96S65 589 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 ANO3Q9BYT9 981 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 VPS16Q9H269 839 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 TAF1DQ9H5J8 278 aaPredicted RBP15.65■□□□□ 0.1
USF1-202ENST00000368020 TAB2Q9NYJ8 693 aa15.65■□□□□ 0.1
USF1-202ENST00000368020 BMP3P12645 472 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 CASP14P31944 242 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 LRRC63Q05C16 580 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 NCBP1Q09161 790 aaKnown RBP15.64■□□□□ 0.09
USF1-202ENST00000368020 RASA3Q14644 834 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 SYDE2Q5VT97 1194 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 ANGEL2Q5VTE6 544 aaKnown RBP15.64■□□□□ 0.09
USF1-202ENST00000368020 HAUS3Q68CZ6 603 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 TRIM65Q6PJ69 517 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 ZNF710Q8N1W2 664 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
USF1-202ENST00000368020 PDCL2Q8N4E4 241 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 NUP88Q99567 741 aaPredicted RBP15.64■□□□□ 0.09
USF1-202ENST00000368020 DEFB129Q9H1M3 183 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 BLOC1S4Q9NUP1 217 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 DNAI1Q9UI46 699 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 MAPK8IP1Q9UQF2 711 aa15.64■□□□□ 0.09
USF1-202ENST00000368020 RAD21O60216 631 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 TBC1D12O60347 775 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 KIF20AO95235 890 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 MAP3K10Q02779 954 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 PNMA5Q96PV4 448 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 SH2D4AQ9H788 454 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 GOPCQ9HD26 462 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 GGA3Q9NZ52 723 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 ASTN2O75129 1339 aaPredicted RBP15.63■□□□□ 0.09
USF1-202ENST00000368020 SPDYE3A6NKU9 549 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 NDUFB10O96000 172 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 CASQ1P31415 396 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 GOLGA8FQ08AF8 430 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 GOLGA8DPQ0D2H9 430 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 IKQ13123 557 aaPredicted RBP15.63■□□□□ 0.09
USF1-202ENST00000368020 TUBB2AQ13885 445 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 IRF2BP1Q8IU81 584 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 ERMNQ8TAM6 284 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 LRRC15Q8TF66 581 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 HOOK2Q96ED9 719 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 TUBB2BQ9BVA1 445 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 TMEM39BQ9GZU3 492 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.63■□□□□ 0.09
USF1-202ENST00000368020 KCNMB3Q9NPA1 279 aa15.63■□□□□ 0.09
USF1-202ENST00000368020 TRIM49BA6NDI0 452 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 POTEMA6NI47 508 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 EDIL3O43854 480 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 Q4G0T1 1027 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 FKBP15Q5T1M5 1219 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 CENPPQ6IPU0 288 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 TOGARAM2Q6ZUX3 1019 aa15.62■□□□□ 0.09
USF1-202ENST00000368020 SIAH1Q8IUQ4 282 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms