RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SERTAD1Q9UHV2 236 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
USF1-201ENST00000368019 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 B4E1Z4 1266 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 MFAP3LO75121 409 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 PDE6AP16499 860 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 CUL4BQ13620 913 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 RTN1Q16799 776 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 ZNF662Q6ZS27 426 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 TOGARAM2Q6ZUX3 1019 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 ADGRA1Q86SQ6 560 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 CCDC12Q8WUD4 166 aaPredicted RBP12.93□□□□□ -0.34
USF1-201ENST00000368019 DHX58Q96C10 678 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 DEFB118Q96PH6 123 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
USF1-201ENST00000368019 DNAJC18Q9H819 358 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 MORF4L1Q9UBU8 362 aa12.93□□□□□ -0.34
USF1-201ENST00000368019 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
USF1-201ENST00000368019 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 LRRC10BA6NIK2 292 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 SEC31AO94979 1220 aaKnown RBP12.92□□□□□ -0.34
USF1-201ENST00000368019 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
USF1-201ENST00000368019 PLCG2P16885 1265 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 XBP1P17861 261 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 HOXA7P31268 230 aaPredicted RBP12.92□□□□□ -0.34
USF1-201ENST00000368019 PABPC4Q13310 644 aaKnown RBP eCLIP12.92□□□□□ -0.34
USF1-201ENST00000368019 BEND6Q5SZJ8 279 aaPredicted RBP12.92□□□□□ -0.34
USF1-201ENST00000368019 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 ISM2Q6H9L7 571 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 MICU3Q86XE3 530 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 PDILTQ8N807 584 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 PHKBQ93100 1093 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 SLC26A6Q9BXS9 759 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 VIPAS39Q9H9C1 493 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 AS3MTQ9HBK9 375 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 MED4Q9NPJ6 270 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 NR2E3Q9Y5X4 410 aa12.92□□□□□ -0.34
USF1-201ENST00000368019 FLT1P17948 1338 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 CTAGE9A4FU28 777 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
USF1-201ENST00000368019 POLR2DO15514 142 aaKnown RBP12.91□□□□□ -0.34
USF1-201ENST00000368019 PPFIA3O75145 1194 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 BAG3O95817 575 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 ASNSP08243 561 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
USF1-201ENST00000368019 ACTN2P35609 894 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 BACE1P56817 501 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 SHROOM1Q2M3G4 852 aaPredicted RBP12.91□□□□□ -0.34
USF1-201ENST00000368019 WDR93Q6P2C0 686 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 RPGRIP1Q96KN7 1286 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 MED15Q96RN5 788 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.91□□□□□ -0.34
USF1-201ENST00000368019 NAPBQ9H115 298 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
USF1-201ENST00000368019 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
USF1-201ENST00000368019 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
USF1-201ENST00000368019 LAMA3Q16787 3333 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 ERICH2A1L162 156 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 HMGCRP04035 888 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 MTMR2Q13614 643 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 WTAPQ15007 396 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 IGSF22Q8N9C0 903 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 RUBCNQ92622 972 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 PAWRQ96IZ0 340 aaKnown RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 P2RX7Q99572 595 aaKnown RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 ANKZF1Q9H8Y5 726 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 ANAPC4Q9UJX5 808 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
USF1-201ENST00000368019 DDX60LQ5H9U9 1706 aaKnown RBP12.9□□□□□ -0.34
USF1-201ENST00000368019 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.35
USF1-201ENST00000368019 RPTORQ8N122 1335 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 POLR3GO15318 223 aaPredicted RBP12.89□□□□□ -0.35
USF1-201ENST00000368019 TRAPPC10P48553 1259 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 NT5C2P49902 561 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 DPYDQ12882 1025 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 TRIM32Q13049 653 aa12.89□□□□□ -0.35
USF1-201ENST00000368019 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms