RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 TBX21Q9UL17 535 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 MYH7BA7E2Y1 1941 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 ARVCFO00192 962 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 SORBS3O60504 671 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 TIMP1P01033 207 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 NKX3-2P78367 333 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 FUT2Q10981 343 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 ARHGEF16Q5VV41 709 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 MORC4Q8TE76 937 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 PHKBQ93100 1093 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 TTYH1Q9H313 450 aaPredicted RBP16.91■□□□□ 0.3
SF3B5-201ENST00000367569 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
SF3B5-201ENST00000367569 GNEQ9Y223 722 aaKnown RBP16.91■□□□□ 0.3
SF3B5-201ENST00000367569 A0A0U1RQG5 324 aaPredicted RBP16.9■□□□□ 0.3
SF3B5-201ENST00000367569 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
SF3B5-201ENST00000367569 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
SF3B5-201ENST00000367569 ARIH2O95376 493 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 POLR2MP0CAP2 368 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 EDNRBP24530 442 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 DNERQ8NFT8 737 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
SF3B5-201ENST00000367569 MROH7Q68CQ1 1323 aa16.9■□□□□ 0.3
SF3B5-201ENST00000367569 NID2Q14112 1375 aa16.89■□□□□ 0.3
SF3B5-201ENST00000367569 MFSD5Q6N075 450 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 SMARCC2Q8TAQ2 1214 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 NSUN6Q8TEA1 469 aaKnown RBP16.89■□□□□ 0.29
SF3B5-201ENST00000367569 PPP1R13LQ8WUF5 828 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 PGBD1Q96JS3 809 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.29
SF3B5-201ENST00000367569 V9GY48 417 aaPredicted RBP16.89■□□□□ 0.29
SF3B5-201ENST00000367569 EYSQ5T1H1 3165 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 DYNC1LI2O43237 492 aaPredicted RBP16.88■□□□□ 0.29
SF3B5-201ENST00000367569 SMARCA1P28370 1054 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 PDIA3P30101 505 aaKnown RBP16.88■□□□□ 0.29
SF3B5-201ENST00000367569 NAPAP54920 295 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 PGM5Q15124 567 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 MPHOSPH6Q99547 160 aaKnown RBP16.88■□□□□ 0.29
SF3B5-201ENST00000367569 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.29
SF3B5-201ENST00000367569 PDCD2LQ9BRP1 358 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
SF3B5-201ENST00000367569 CD4P01730 458 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 NR3C2P08235 984 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 GHRHRQ02643 423 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
SF3B5-201ENST00000367569 IQSEC1Q6DN90 963 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 SLC43A3Q8NBI5 491 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 SLC26A6Q9BXS9 759 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 PPP1R12CQ9BZL4 782 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 AP5M1Q9H0R1 490 aa16.87■□□□□ 0.29
SF3B5-201ENST00000367569 STXBP3O00186 592 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 MEIS2O14770 477 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 ADAMTS3O15072 1205 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 LARGE1O95461 756 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
SF3B5-201ENST00000367569 CSF2RAP15509 400 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 AK2P54819 239 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 TRAF1Q13077 416 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 STXBP2Q15833 593 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 LY6KQ17RY6 165 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 MYLIPQ8WY64 445 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 CUL5Q93034 780 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 GRIN2DO15399 1336 aa16.86■□□□□ 0.29
SF3B5-201ENST00000367569 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.85■□□□□ 0.29
SF3B5-201ENST00000367569 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.85■□□□□ 0.29
SF3B5-201ENST00000367569 TLR3O15455 904 aaKnown RBP16.85■□□□□ 0.29
SF3B5-201ENST00000367569 RCAN1P53805 252 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 PSMC6P62333 389 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3B5-201ENST00000367569 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 TMEM240Q5SV17 173 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3B5-201ENST00000367569 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 PSTPIP2Q9H939 334 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 TMEM260Q9NX78 707 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 Q9Y3F1 56 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 VCANP13611 3396 aa16.85■□□□□ 0.29
SF3B5-201ENST00000367569 RBM47A0AV96 593 aaKnown RBP16.84■□□□□ 0.29
SF3B5-201ENST00000367569 B4DLN1 442 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 CABYRO75952 493 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 RGS20O76081 388 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 MYL3P08590 195 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 ACRP10323 421 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 CCND2P30279 289 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 CYP2C18P33260 490 aa16.84■□□□□ 0.29
SF3B5-201ENST00000367569 ADCY7P51828 1080 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms