RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 TTBK2Q6IQ55 1244 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 TMC6Q7Z403 805 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 GMCL1Q96IK5 515 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 MS4A4AQ96JQ5 239 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 NFE2L3Q9Y4A8 694 aa12.25□□□□□ -0.45
H3F3A-202ENST00000366814 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
H3F3A-202ENST00000366814 USP17L10C9JJH3 530 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 IRF6O14896 467 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 CETPP11597 493 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 GCFC2P16383 781 aaKnown RBP12.24□□□□□ -0.45
H3F3A-202ENST00000366814 SLC16A2P36021 539 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 TERF1P54274 439 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 TRAF1Q13077 416 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 PPIL2Q13356 520 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 SNAPC2Q13487 334 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 KARSQ15046 597 aaKnown RBP12.24□□□□□ -0.45
H3F3A-202ENST00000366814 CALCRLQ16602 461 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 TPD52L1Q16890 204 aaPredicted RBP12.24□□□□□ -0.45
H3F3A-202ENST00000366814 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 CABP7Q86V35 215 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 ZNF296Q8WUU4 475 aaPredicted RBP12.24□□□□□ -0.45
H3F3A-202ENST00000366814 CALML4Q96GE6 196 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 PTPN18Q99952 460 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 GTPBP4Q9BZE4 634 aaKnown RBP12.24□□□□□ -0.45
H3F3A-202ENST00000366814 R3HDMLQ9H3Y0 253 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 PSTPIP2Q9H939 334 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 PYCARDQ9ULZ3 195 aa12.24□□□□□ -0.45
H3F3A-202ENST00000366814 PHF20L1A8MW92 1017 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 F5H6K3 240 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 GH2P01242 217 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
H3F3A-202ENST00000366814 AMPD3Q01432 767 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 KLRC3Q07444 240 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
H3F3A-202ENST00000366814 CACTINQ8WUQ7 758 aaKnown RBP12.23□□□□□ -0.45
H3F3A-202ENST00000366814 BRI3BPQ8WY22 251 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 MCOLN1Q9GZU1 580 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 TMEM260Q9NX78 707 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 MARCH6O60337 910 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 TBC1D12O60347 775 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 FKTNO75072 461 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 PPP1R37O75864 691 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 RPN1P04843 607 aaKnown RBP12.23□□□□□ -0.45
H3F3A-202ENST00000366814 ATP1A3P13637 1013 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 MAP3K10Q02779 954 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 STIM1Q13586 685 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 QRICH1Q2TAL8 776 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
H3F3A-202ENST00000366814 SPATA1Q5VX52 437 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 PPP4R3AQ6IN85 833 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 ABHD8Q96I13 439 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 CTAGE1Q96RT6 745 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 AMNQ9BXJ7 453 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 CFHR5Q9BXR6 569 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 HSD3B7Q9H2F3 369 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 SH2D4AQ9H788 454 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 GOPCQ9HD26 462 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 PCDHA1Q9Y5I3 950 aa12.23□□□□□ -0.45
H3F3A-202ENST00000366814 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
H3F3A-202ENST00000366814 BMP3P12645 472 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
H3F3A-202ENST00000366814 LRMPQ12912 555 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 CUL4BQ13620 913 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
H3F3A-202ENST00000366814 KLHL10Q6JEL2 608 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 CTU1Q7Z7A3 348 aaKnown RBP12.22□□□□□ -0.45
H3F3A-202ENST00000366814 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 ANKRD20A12PQ8NF67 263 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 STAMQ92783 540 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 BLZF1Q9H2G9 400 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 R3HCC1Q9Y3T6 440 aaKnown RBP12.22□□□□□ -0.45
H3F3A-202ENST00000366814 ZHX2Q9Y6X8 837 aa12.22□□□□□ -0.45
H3F3A-202ENST00000366814 NDUFB10O96000 172 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 SKILP12757 684 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 CDC25AP30304 524 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 TECP42680 631 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 TXKP42681 527 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 CRHR2Q13324 411 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 AP3B2Q13367 1082 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 PDIA5Q14554 519 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 KCNB1Q14721 858 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
H3F3A-202ENST00000366814 FILIP1LQ4L180 1135 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 SYDE2Q5VT97 1194 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 TRMT44Q8IYL2 757 aaKnown RBP12.21□□□□□ -0.45
H3F3A-202ENST00000366814 IGSF22Q8N9C0 903 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 ZFYVE28Q9HCC9 887 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 LRWD1Q9UFC0 647 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
H3F3A-202ENST00000366814 PP2D1A8MPX8 630 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 TMEM232C9JQI7 657 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 PPP1R11O60927 126 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms