RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 HINFPQ9BQA5 517 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 NCOA5Q9HCD5 579 aaKnown RBP12.69□□□□□ -0.38
CNOT4-203ENST00000361528 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 MYH8P13535 1937 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
CNOT4-203ENST00000361528 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 BIRC5O15392 142 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 SKIP12755 728 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 CTNNA1P35221 906 aaKnown RBP12.69□□□□□ -0.38
CNOT4-203ENST00000361528 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■■■□ 20.8
CNOT4-203ENST00000361528 GUCY2FP51841 1108 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 USP46P62068 366 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 CDK17Q00537 523 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 EXOC3L1Q86VI1 746 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 TLCD1Q96CP7 247 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 OXCT2Q9BYC2 517 aaPredicted RBP12.69□□□□□ -0.38
CNOT4-203ENST00000361528 CAPN11Q9UMQ6 739 aa12.69□□□□□ -0.38
CNOT4-203ENST00000361528 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 RNF225M0QZC1 329 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 TPBGLP0DKB5 382 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 CCNB1P14635 433 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 OXCT1P55809 520 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MCL1Q07820 350 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MAP7Q14244 749 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 KRT31Q15323 416 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 TTF1Q15361 905 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 CLPPQ16740 277 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 GSTA3Q16772 222 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 SPDYCQ5MJ68 293 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 HIC2Q96JB3 615 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MAML3Q96JK9 1138 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 SPATA16Q9BXB7 569 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 ISCUQ9H1K1 167 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 THAP9Q9H5L6 903 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 NOVA2Q9UNW9 492 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 CETN3O15182 167 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 FOXN1O15353 648 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 TROVE2P10155 538 aaKnown RBP eCLIP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MAGOHP61326 146 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 KPNB1Q14974 876 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 CNPY1Q3B7I2 92 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 BEND3Q5T5X7 828 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MCM10Q7L590 875 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 AACSQ86V21 672 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 PHC3Q8NDX5 983 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MAGOHBQ96A72 148 aaKnown RBP12.68□□□□□ -0.38
CNOT4-203ENST00000361528 LRRC2Q9BYS8 371 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 LACRTQ9GZZ8 138 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 FAM114A2Q9NRY5 505 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 ABCF3Q9NUQ8 709 aa12.68□□□□□ -0.38
CNOT4-203ENST00000361528 MST1RQ04912 1400 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 EIF4E1BA6NMX2 242 aaKnown RBP12.67□□□□□ -0.38
CNOT4-203ENST00000361528 A8MUI8 341 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 CHGBP05060 677 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 PDE6CP51160 858 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 CACNA2D1P54289 1103 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 PPARAQ07869 468 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 PKN1Q16512 942 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 SAMD3Q8N6K7 520 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 DHRS1Q96LJ7 313 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 CATSPER2Q96P56 530 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.382e-7■■■□□ 14.8
CNOT4-203ENST00000361528 STK38LQ9Y2H1 464 aa12.67□□□□□ -0.38
CNOT4-203ENST00000361528 SMAPO00193 183 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ATP5HO75947 161 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 RAPGEF3O95398 923 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ALOX15P16050 662 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 SERPINB4P48594 390 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 CD97P48960 835 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ZNF827Q17R98 1081 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 MUM1Q2TAK8 710 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 WASHC2DQ5SRD0 308 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 KLC3Q6P597 504 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 OLFML1Q6UWY5 402 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms