RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PPIL2Q13356 520 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 DTHD1Q6ZMT9 781 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 TMC6Q7Z403 805 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 CLEC4DQ8WXI8 215 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 TUBE1Q9UJT0 475 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 KCNH3Q9ULD8 1083 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 RIPK3Q9Y572 518 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 SPDYE16A6NNV3 312 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 BIN1O00499 593 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 CELF2O95319 508 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 CFBP00751 764 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 PRPHP41219 470 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 COG2Q14746 738 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 MUM1L1Q5H9M0 696 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 CST9Q5W186 159 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 GADL1Q6ZQY3 521 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 CRYGNQ8WXF5 182 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 HOMER2Q9NSB8 354 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 HPSEQ9Y251 543 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 USP27XA6NNY8 438 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 GCOM1H8Y6P7 765 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 SLC37A4O43826 429 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 POLR2MP0CAP2 368 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 GCFC2P16383 781 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 LONP1P36776 959 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 TRMT1Q9NXH9 659 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 OGFRQ9NZT2 677 aa14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 HOOK1Q9UJC3 728 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 ZNF214Q9UL59 606 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-201ENST00000360718 OR52Z1P0C646 297 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 ALAS1P13196 640 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 USP11P51784 963 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 TMEM132BQ14DG7 1078 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 UTP14CQ5TAP6 766 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 FCHSD1Q86WN1 690 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 CCDC34Q96HJ3 373 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 EHMT1Q9H9B1 1298 aa14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 GBA2Q9HCG7 927 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-201ENST00000360718 CXCL11O14625 94 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 TXLNAP40222 546 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 FANCCQ00597 558 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 NCAPHQ15003 741 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 PPP4R3AQ6IN85 833 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 ERO1AQ96HE7 468 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 EPSTI1Q96J88 318 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 HOXC10Q9NYD6 342 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 TRPM7Q96QT4 1865 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 CALCRLQ16602 461 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 MCF2L2Q86YR7 1114 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 ELOA2Q8IYF1 753 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 PROCA1Q8NCQ7 364 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 SLC10A4Q96EP9 437 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 GTPBP4Q9BZE4 634 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 MYPNQ86TC9 1320 aa14.78□□□□□ -0.04
SQSTM1-201ENST00000360718 A0A087X0B3 334 aa14.77□□□□□ -0.04
SQSTM1-201ENST00000360718 MYL5Q02045 173 aa14.77□□□□□ -0.04
SQSTM1-201ENST00000360718 MKRN3Q13064 507 aaKnown RBP14.77□□□□□ -0.04
SQSTM1-201ENST00000360718 SYMPKQ92797 1274 aaKnown RBP14.77□□□□□ -0.04
SQSTM1-201ENST00000360718 PYM1Q9BRP8 204 aaKnown RBP14.77□□□□□ -0.04
SQSTM1-201ENST00000360718 DDX25Q9UHL0 483 aaKnown RBP14.77□□□□□ -0.04
SQSTM1-201ENST00000360718 UNCXA6NJT0 531 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 POLR2DO15514 142 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 MARCH6O60337 910 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 SLU7O95391 586 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 CDC25AP30304 524 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 HOXA7P31268 230 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 ARHGAP4P98171 946 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 CNNM3Q8NE01 707 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 GJA10Q969M2 543 aa14.77□□□□□ -0.05
SQSTM1-201ENST00000360718 SERPINC1P01008 464 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 SREBF1P36956 1147 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 HSD17B4P51659 736 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 OAZ1P54368 228 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 UBXN2AP68543 259 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 DMTNQ08495 405 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 TMEM266Q2M3C6 531 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 SNRNP48Q6IEG0 339 aaKnown RBP14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 KANK3Q6NY19 840 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 ARMCX5Q6P1M9 558 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 MOXD1Q6UVY6 613 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 SAMD3Q8N6K7 520 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 TRERF1Q96PN7 1200 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 MTMR9Q96QG7 549 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 UIMC1Q96RL1 719 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 RAB34Q9BZG1 259 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 PP2D1A8MPX8 630 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 UBASH3AP57075 661 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 E4F1Q66K89 784 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 KRBA2Q6ZNG9 492 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 PDILTQ8N807 584 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 ZNF397Q8NF99 534 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 AK8Q96MA6 479 aa14.76□□□□□ -0.05
SQSTM1-201ENST00000360718 PURBQ96QR8 312 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms