RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 ANO3Q9BYT9 981 aa7.35□□□□□ -1.23
SUDS3-201ENST00000360286 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.35□□□□□ -1.23
SUDS3-201ENST00000360286 GLT8D2Q9H1C3 349 aa7.35□□□□□ -1.23
SUDS3-201ENST00000360286 ABHD16BQ9H3Z7 469 aa7.35□□□□□ -1.23
SUDS3-201ENST00000360286 SMC3Q9UQE7 1217 aa7.35□□□□□ -1.23
SUDS3-201ENST00000360286 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
SUDS3-201ENST00000360286 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.35□□□□□ -1.23
SUDS3-201ENST00000360286 MYH7BA7E2Y1 1941 aa7.35□□□□□ -1.23
SUDS3-201ENST00000360286 FRMPD4Q14CM0 1322 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 KIAA0100Q14667 2235 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 LOC102724159A0A0B4J2E5 919 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 RBM47A0AV96 593 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 POTEFA5A3E0 1075 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 FAM205CA6NFA0 338 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 BTBD18B2RXH4 712 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 SORBS3O60504 671 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 EIF3JO75822 258 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 ARIH2O95376 493 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 SMPD1P17405 629 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 EN2P19622 333 aaPredicted RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 NR5A1Q13285 461 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 AP3B2Q13367 1082 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 TRIM29Q14134 588 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 PWP2Q15269 919 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 EARS2Q5JPH6 523 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 GJC2Q5T442 439 aaPredicted RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 IQSEC1Q6DN90 963 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 DAGLBQ8NCG7 672 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 CYP2W1Q8TAV3 490 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 BICD2Q8TD16 824 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 COPS5Q92905 334 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 MPHOSPH6Q99547 160 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 WDR11Q9BZH6 1224 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 BCAS3Q9H6U6 928 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 VTA1Q9NP79 307 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 PAK6Q9NQU5 681 aaPredicted RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
SUDS3-201ENST00000360286 FAM184BQ9ULE4 1060 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 KIAA1217Q5T5P2 1943 aa7.34□□□□□ -1.23
SUDS3-201ENST00000360286 SEPT4O43236 478 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 DYNC1LI2O43237 492 aaPredicted RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 SGPL1O95470 568 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 TFRCP02786 760 aaKnown RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 MMP1P03956 469 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 GJB1P08034 283 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 AKR1A1P14550 325 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 ITGB5P18084 799 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 KRT2P35908 639 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 SREBF1P36956 1147 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 SOX10P56693 466 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 ARHGAP4P98171 946 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 SP2Q02086 613 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 TNFAIP2Q03169 654 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 SEMA3FQ13275 785 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 LY6KQ17RY6 165 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 PCNX4Q63HM2 1172 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 LARP1BQ659C4 914 aaKnown RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 GALNT17Q6IS24 598 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 DIS3L2Q8IYB7 885 aaKnown RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 FBXO18Q8NFZ0 1043 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 TBCKQ8TEA7 893 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 CRYGNQ8WXF5 182 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 TNFRSF25Q93038 417 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 INTS4Q96HW7 963 aaKnown RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 UIMC1Q96RL1 719 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 EHMT1Q9H9B1 1298 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 NRBP1Q9UHY1 535 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
SUDS3-201ENST00000360286 UBIAD1Q9Y5Z9 338 aa7.33□□□□□ -1.24
SUDS3-201ENST00000360286 LRRC37A2A6NM11 1700 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 SPATA31C2B4DYI2 1134 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 KIF28PB7ZC32 967 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 FAM86B1E9PN63 330 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 ATP9AO75110 1047 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 PGK1P00558 417 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 MYCNP04198 464 aaPredicted RBP7.32□□□□□ -1.24
SUDS3-201ENST00000360286 CYP3A4P08684 503 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 FAM86B2P0C5J1 330 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 ARP10275 920 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 RARBP10826 455 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 ZNF76P36508 570 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 GJA8P48165 433 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 BEX3Q00994 111 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 NONOQ15233 471 aaKnown RBP eCLIP7.32□□□□□ -1.24
SUDS3-201ENST00000360286 INF2Q27J81 1249 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 MCTP2Q6DN12 878 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 XRRA1Q6P2D8 792 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 CCDC62Q6P9F0 684 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 PIK3AP1Q6ZUJ8 805 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 KRT25Q7Z3Z0 450 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 NLRX1Q86UT6 975 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 TEX2Q8IWB9 1127 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 U2AF1L4Q8WU68 220 aaKnown RBP7.32□□□□□ -1.24
SUDS3-201ENST00000360286 INPP4AQ96PE3 977 aaPredicted RBP7.32□□□□□ -1.24
SUDS3-201ENST00000360286 MXRA8Q9BRK3 442 aa7.32□□□□□ -1.24
SUDS3-201ENST00000360286 CRISPLD2Q9H0B8 497 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms