RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 CHURC1Q8WUH1 139 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 BADQ92934 168 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 GLT1D1Q96MS3 346 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 NUP88Q99567 741 aaPredicted RBP7.91□□□□□ -1.14
HHLA3-201ENST00000359875 FSD1Q9BTV5 496 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 SEZ6LQ9BYH1 1024 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 ACAD9Q9H845 621 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 ZFAND3Q9H8U3 227 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 STARD7Q9NQZ5 370 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 ELP1O95163 1332 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 SYNRGQ9UMZ2 1314 aa7.91□□□□□ -1.14
HHLA3-201ENST00000359875 LOC102724159A0A0B4J2E5 919 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 FAM181BA6NEQ2 426 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 H3BM21 787 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 M0R2C6 588 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 MAN1A2O60476 641 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 PRDM1O75626 825 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 SNAI1O95863 264 aaPredicted RBP7.9□□□□□ -1.14
HHLA3-201ENST00000359875 PGK1P00558 417 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 BMP2P12643 396 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 RAG1P15918 1043 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 SLC1A4P43007 532 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 NT5C2P49902 561 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 NKX3-2P78367 333 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 FPGSQ05932 587 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 AAMPQ13685 434 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 ACVR2BQ13705 512 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 PWP2Q15269 919 aaKnown RBP7.9□□□□□ -1.14
HHLA3-201ENST00000359875 NR6A1Q15406 480 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 SHHQ15465 462 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 SLFN13Q68D06 897 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 CCSAPQ6IQ19 270 aaPredicted RBP7.9□□□□□ -1.14
HHLA3-201ENST00000359875 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 UPF3AQ9H1J1 476 aaKnown RBP7.9□□□□□ -1.14
HHLA3-201ENST00000359875 ZHX1Q9UKY1 873 aaPredicted RBP7.9□□□□□ -1.14
HHLA3-201ENST00000359875 PNMA2Q9UL42 364 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 RIPK3Q9Y572 518 aa7.9□□□□□ -1.14
HHLA3-201ENST00000359875 COL11A1P12107 1806 aaPredicted RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 ZMYM6O95789 1325 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TRIM43BA6NCK2 446 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 ASB14A6NK59 587 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TSPY2A6NKD2 308 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TMEM232C9JQI7 657 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 PQBP1O60828 265 aaKnown RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 PCP11498 1178 aaKnown RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TAL1P17542 331 aaPredicted RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 GJA9P57773 515 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TFAP4Q01664 338 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 NBPF20Q3BBV1 942 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 CCDC144BQ3MJ40 725 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TSHZ3Q63HK5 1081 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 RCSD1Q6JBY9 416 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 CCDC129Q6ZRS4 1044 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 ARMCX2Q7L311 632 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 LRRC47Q8N1G4 583 aaKnown RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 FAM133AQ8N9E0 248 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 STAG1Q8WVM7 1258 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TRIM43Q96BQ3 446 aaPredicted RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 EVI5LQ96CN4 794 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 GUCD1Q96NT3 240 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 KCTD15Q96SI1 283 aaPredicted RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 RAVER2Q9HCJ3 691 aaKnown RBP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TMEM39AQ9NV64 488 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 ANAPC4Q9UJX5 808 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 TBX21Q9UL17 535 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 STX8Q9UNK0 236 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
HHLA3-201ENST00000359875 PLXNA1Q9UIW2 1896 aa7.89□□□□□ -1.15
HHLA3-201ENST00000359875 SALL3Q9BXA9 1300 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 A0A0U1RQG5 324 aaPredicted RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 TLR3O15455 904 aaKnown RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 ORC4O43929 436 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 CABYRO75952 493 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 TIMP1P01033 207 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 FGRP09769 529 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 C6orf222P0C671 652 aaPredicted RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 NOVP48745 357 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 CDK7P50613 346 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 FAAP100Q0VG06 881 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 IKQ13123 557 aaPredicted RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 KCNA10Q16322 511 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 C9orf50Q5SZB4 431 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 MFSD5Q6N075 450 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 CCDC144CPQ8IYA2 1237 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 STK11IPQ8N1F8 1099 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 RNPC3Q96LT9 517 aaKnown RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 SEC62Q99442 399 aaKnown RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 KATNBL1Q9H079 304 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 A1CFQ9NQ94 594 aaKnown RBP7.88□□□□□ -1.15
HHLA3-201ENST00000359875 HELLSQ9NRZ9 838 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 RNF146Q9NTX7 359 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 Q9Y3F1 56 aa7.88□□□□□ -1.15
HHLA3-201ENST00000359875 ZNF536O15090 1300 aa7.87□□□□□ -1.15
HHLA3-201ENST00000359875 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.87□□□□□ -1.15
HHLA3-201ENST00000359875 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.87□□□□□ -1.15
HHLA3-201ENST00000359875 ARVCFO00192 962 aa7.87□□□□□ -1.15
HHLA3-201ENST00000359875 ZEB2O60315 1214 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms