RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 E2F4Q16254 413 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 GIMAP8Q8ND71 665 aaPredicted RBP12.38□□□□□ -0.43
SSU72-202ENST00000359060 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 CWC15Q9P013 229 aaKnown RBP12.38□□□□□ -0.43
SSU72-202ENST00000359060 COL1A1P02452 1464 aaPredicted RBP12.38□□□□□ -0.43
SSU72-202ENST00000359060 LRP6O75581 1613 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 NUP98P52948 1817 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 MYMKA6NI61 221 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 STAT3P40763 770 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
SSU72-202ENST00000359060 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 HDAC6Q9UBN7 1215 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 SLC37A4O43826 429 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 EIF4A3P38919 411 aaKnown RBP12.38□□□□□ -0.43
SSU72-202ENST00000359060 TUBB4BP68371 445 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 BRD3Q15059 726 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 MYCT1Q8N699 235 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
SSU72-202ENST00000359060 RAD17O75943 681 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
SSU72-202ENST00000359060 NPY5RQ15761 445 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 JMJD4Q9H9V9 463 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
SSU72-202ENST00000359060 CXCR5P32302 372 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 ERVK-24P63145 666 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 RASSF7Q02833 373 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 TRAF1Q13077 416 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 TAF3Q5VWG9 929 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 RAD54LQ92698 747 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
SSU72-202ENST00000359060 A0A0U1RQJ8 604 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 BMP3P12645 472 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 HSPA1LP34931 641 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 ATRIPQ8WXE1 791 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 F5H6K3 240 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 EPB41P11171 864 aaKnown RBP12.37□□□□□ -0.43
SSU72-202ENST00000359060 NR2F2P24468 414 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 KLRC3Q07444 240 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 DDR1Q08345 913 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 ASIC2Q16515 512 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 DAGLBQ8NCG7 672 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 KBTBD4Q9NVX7 518 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 MYO1AQ9UBC5 1043 aa12.37□□□□□ -0.43
SSU72-202ENST00000359060 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
SSU72-202ENST00000359060 BAZ2AQ9UIF9 1905 aaKnown RBP12.36□□□□□ -0.43
SSU72-202ENST00000359060 DMTNQ08495 405 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 ZFYVE27Q5T4F4 411 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 MED15Q96RN5 788 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
SSU72-202ENST00000359060 DDX4Q9NQI0 724 aaKnown RBP12.36□□□□□ -0.43
SSU72-202ENST00000359060 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 IL1R1P14778 569 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 CAPN2P17655 700 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 MRPS25P82663 173 aaKnown RBP12.36□□□□□ -0.43
SSU72-202ENST00000359060 AOC3Q16853 763 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 POTEEQ6S8J3 1075 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 SPATA20Q8TB22 786 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 MTRQ99707 1265 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 PDE11AQ9HCR9 933 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 ECE2O60344 883 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 CHRNA5P30532 468 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 RHBDL3P58872 404 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 SP4Q02446 784 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 TJP1Q07157 1748 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 CC2D1AQ6P1N0 951 aaPredicted RBP12.36□□□□□ -0.43
SSU72-202ENST00000359060 TRIM58Q8NG06 486 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 RIC8AQ9NPQ8 531 aa12.36□□□□□ -0.43
SSU72-202ENST00000359060 MORC2Q9Y6X9 1032 aaPredicted RBP12.36□□□□□ -0.43
SSU72-202ENST00000359060 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 CCDC151A5D8V7 595 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 SFI1A8K8P3 1242 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 GAS7O60861 476 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 COASYQ13057 564 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 MIGA2Q7L4E1 593 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 C7orf25Q9BPX7 421 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 NUP188Q5SRE5 1749 aa12.35□□□□□ -0.43
SSU72-202ENST00000359060 NPHP3-ACAD11A0A0J9YXS1 232 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms