RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SBF1O95248 1867 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 SPDYE3A6NKU9 549 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 PPP1R3GB7ZBB8 358 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 SERPINC1P01008 464 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 RPN1P04843 607 aaKnown RBP14.18□□□□□ -0.14
GGPS1-202ENST00000358966 CREBRFQ8IUR6 639 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 SNX29Q8TEQ0 813 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 PNMA5Q96PV4 448 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 CCSER1Q9C0I3 900 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 TRIM49BA6NDI0 452 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 IKBKBO14920 756 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
GGPS1-202ENST00000358966 MCM6Q14566 821 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 DYMQ7RTS9 669 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 TMC6Q7Z403 805 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 ELOA2Q8IYF1 753 aaPredicted RBP14.18□□□□□ -0.14
GGPS1-202ENST00000358966 FAM177A1Q8N128 213 aaPredicted RBP14.18□□□□□ -0.14
GGPS1-202ENST00000358966 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
GGPS1-202ENST00000358966 MLKLQ8NB16 471 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 MRFAP1L1Q96HT8 127 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 CEP83Q9Y592 693 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 SMTNL1A8MU46 457 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 NFIBO00712 420 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 PEX10O60683 326 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 VCAM1P19320 739 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 KMT5BQ4FZB7 885 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 PPP4R3AQ6IN85 833 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 LDHDQ86WU2 507 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 KRT222Q8N1A0 295 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 GSDMAQ96QA5 445 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 PURBQ96QR8 312 aaKnown RBP14.17□□□□□ -0.14
GGPS1-202ENST00000358966 RAVER2Q9HCJ3 691 aaKnown RBP14.17□□□□□ -0.14
GGPS1-202ENST00000358966 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 BLOC1S4Q9NUP1 217 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 SPTLC3Q9NUV7 552 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 PCDHA12Q9UN75 941 aa14.17□□□□□ -0.14
GGPS1-202ENST00000358966 SYNRGQ9UMZ2 1314 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 FLOT1O75955 427 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 FCER1AP12319 257 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 PMS1P54277 932 aaKnown RBP14.16□□□□□ -0.14
GGPS1-202ENST00000358966 UBASH3AP57075 661 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 ICE2Q659A1 982 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 GPATCH11Q8N954 259 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 CRYGNQ8WXF5 182 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 LENG9Q96B70 501 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 RASSF4Q9H2L5 321 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 RANBP17Q9H2T7 1088 aaKnown RBP14.16□□□□□ -0.14
GGPS1-202ENST00000358966 KBTBD4Q9NVX7 518 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 SSC5DA1L4H1 1573 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 ZNF536O15090 1300 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 POTEB3A0JP26 581 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 POTECB2RU33 542 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 ADM5C9JUS6 153 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 KLRC4O43908 158 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 PRCPP42785 496 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 GYS2P54840 703 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 HMGCS2P54868 508 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
GGPS1-202ENST00000358966 POTEBQ6S5H4 581 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 GPC2Q8N158 579 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 HOOK2Q96ED9 719 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 POLD4Q9HCU8 107 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 ZHX2Q9Y6X8 837 aa14.16□□□□□ -0.14
GGPS1-202ENST00000358966 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
GGPS1-202ENST00000358966 ASIC1P78348 528 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 TMEM266Q2M3C6 531 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 TRIML1Q8N9V2 468 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 KIF18AQ8NI77 898 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 CHURC1Q8WUH1 139 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 CCDC34Q96HJ3 373 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 TRIM9Q9C026 710 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 CCPG1Q9ULG6 757 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 MEIS1O00470 390 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 CTNND1O60716 968 aaKnown RBP14.15□□□□□ -0.14
GGPS1-202ENST00000358966 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
GGPS1-202ENST00000358966 GLIS3Q8NEA6 775 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 AK8Q96MA6 479 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 RPAP3Q9H6T3 665 aaPredicted RBP14.15□□□□□ -0.14
GGPS1-202ENST00000358966 COL20A1Q9P218 1284 aa14.15□□□□□ -0.14
GGPS1-202ENST00000358966 CCDC172P0C7W6 258 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 ALAS1P13196 640 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 TPM4P67936 248 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 CYP4A11Q02928 519 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 CALML4Q96GE6 196 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 WDR18Q9BV38 432 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 SH2D4AQ9H788 454 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 MYMKA6NI61 221 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 GOLGA6L6A8MZA4 724 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 E9PMD0 336 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 CHMP2AO43633 222 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 ZNF18P17022 549 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 SREBF1P36956 1147 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 STK4Q13043 487 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
GGPS1-202ENST00000358966 POTEGQ6S5H5 508 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms