RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CEP57Q86XR8 500 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 CLEC10AQ8IUN9 316 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 U2AF1L4Q8WU68 220 aaKnown RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 CCDC114Q96M63 670 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 OSBPL9Q96SU4 736 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 STIM2Q9P246 746 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 GCOM1H8Y6P7 765 aaPredicted RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 MYZAPP0CAP1 466 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 NR2F2P24468 414 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 CTNNA1P35221 906 aaKnown RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 GRM4Q14833 912 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 ARFGAP2Q8N6H7 521 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 CCDC155Q8N6L0 562 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 SPATA4Q8NEY3 305 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 CEP95Q96GE4 821 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 MS4A14Q96JA4 679 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 ARMCX3Q9UH62 379 aaPredicted RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 FEZ2Q9UHY8 353 aaPredicted RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 COL4A3BPQ9Y5P4 624 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 ANO9A1A5B4 782 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 PALMO75781 387 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 RHOBTB3O94955 611 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 XRCC5P13010 732 aaKnown RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 NNTQ13423 1086 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 KCNB1Q14721 858 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 KRT71Q3SY84 523 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 HAUS3Q68CZ6 603 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 C3orf67Q6ZVT6 689 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 B4GALNT4Q76KP1 1039 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 HS2ST1Q7LGA3 356 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 MSANTD4Q8NCY6 345 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 LMBR1Q8WVP7 490 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 MED15Q96RN5 788 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 SH3GLB2Q9NR46 395 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 ANAPC4Q9UJX5 808 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 ZBTB21Q9ULJ3 1066 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 DNM3Q9UQ16 869 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 FER1L4A9Z1Z3 1794 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 PSMD14O00487 310 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 KRIT1O00522 736 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 FANCGO15287 622 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 FLOT1O75955 427 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 RPL13P26373 211 aaKnown RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 HERVK_113P62684 666 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 ARHGAP44Q17R89 818 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 C12orf60Q5U649 245 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 SH2D3CQ8N5H7 860 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 GIMAP8Q8ND71 665 aaPredicted RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.21
RTN4-203ENST00000357376 IQCDQ96DY2 449 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 AP1M1Q9BXS5 423 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 NT5C3AQ9H0P0 336 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 HPCAL4Q9UM19 191 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 RGPD2P0DJD1 1756 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 GSTTP1A0A1W2PQM5 241 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 MAP2K1Q02750 393 aaPredicted RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 EZH2Q15910 746 aaKnown RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 UHMK1Q8TAS1 419 aaKnown RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 SCLT1Q96NL6 688 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 CCSER1Q9C0I3 900 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 STK17AQ9UEE5 414 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 SNX12Q9UMY4 172 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 CAPN6Q9Y6Q1 641 aa7.52□□□□□ -1.21
RTN4-203ENST00000357376 PDS5AQ29RF7 1337 aaKnown RBP7.52□□□□□ -1.21
RTN4-203ENST00000357376 E9PMD0 336 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 HGSO14964 777 aaPredicted RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 CLIC2O15247 247 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 CETN1Q12798 172 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 E2F4Q16254 413 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 FOXR1Q6PIV2 292 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 UNC13DQ70J99 1090 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 TRAPPC11Q7Z392 1133 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 SH3RF1Q7Z6J0 888 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 USP40Q9NVE5 1235 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 LCMT1Q9UIC8 334 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 MED1Q15648 1581 aaPredicted RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 ARHGAP25P42331 645 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 TXNRD3Q86VQ6 643 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 MYCT1Q8N699 235 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 PROCA1Q8NCQ7 364 aaPredicted RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 CCDC26Q8TAB7 109 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 LRRC45Q96CN5 670 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 PCDHA1Q9Y5I3 950 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 STXBP3O00186 592 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 CYP2J2P51589 502 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 SNAP25P60880 206 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 LLGL1Q15334 1064 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 EXOC3L4Q17RC7 722 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 FAM83BQ5T0W9 1011 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 CLEC4GQ6UXB4 293 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 CCNI2Q6ZMN8 369 aaPredicted RBP7.51□□□□□ -1.21
RTN4-203ENST00000357376 CABS1Q96KC9 395 aa7.51□□□□□ -1.21
RTN4-203ENST00000357376 UTP11Q9Y3A2 253 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms