RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 LRRC15Q8TF66 581 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 CDK5RAP3Q96JB5 506 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 BLZF1Q9H2G9 400 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 KDM3AQ9Y4C1 1321 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 COG2Q14746 738 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 CPXCR1Q8N123 301 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 ENOX1Q8TC92 643 aaKnown RBP25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 ATG4CQ96DT6 458 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 CDCA5Q96FF9 252 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 PLIN2Q99541 437 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 C7orf25Q9BPX7 421 aa25.68■■□□□ 1.7
SCAMP3-202ENST00000355379 LOC285556D6RIA3 1793 aa25.67■■□□□ 1.7
SCAMP3-202ENST00000355379 IGLV3-22A0A075B6J6 115 aa25.67■■□□□ 1.7
SCAMP3-202ENST00000355379 ALAS1P13196 640 aa25.67■■□□□ 1.7
SCAMP3-202ENST00000355379 REPS2Q8NFH8 660 aa25.67■■□□□ 1.7
SCAMP3-202ENST00000355379 TAF1DQ9H5J8 278 aaPredicted RBP25.67■■□□□ 1.7
SCAMP3-202ENST00000355379 RPTORQ8N122 1335 aa25.66■■□□□ 1.7
SCAMP3-202ENST00000355379 DLK2Q6UY11 383 aa25.66■■□□□ 1.7
SCAMP3-202ENST00000355379 MRFAP1L1Q96HT8 127 aa25.66■■□□□ 1.7
SCAMP3-202ENST00000355379 MAF1Q9H063 256 aa25.66■■□□□ 1.7
SCAMP3-202ENST00000355379 NFIBO00712 420 aa25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 ATP2A1O14983 1001 aa25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 ZNF658Q5TYW1 1059 aaPredicted RBP25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 GTPBP4Q9BZE4 634 aaKnown RBP25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 LRRC27Q9C0I9 530 aa25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 NT5C3AQ9H0P0 336 aa25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 BLOC1S4Q9NUP1 217 aa25.65■■□□□ 1.7
SCAMP3-202ENST00000355379 MSH4O15457 936 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 PTMAP06454 111 aaKnown RBP25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 SPIRE1Q08AE8 756 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 SV2BQ7L1I2 683 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 PNMA8AQ86V59 439 aaPredicted RBP25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 ANKRD13AQ8IZ07 590 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 NUDT12Q9BQG2 462 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 HOXC10Q9NYD6 342 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 FRMPD4Q14CM0 1322 aa25.64■■□□□ 1.7
SCAMP3-202ENST00000355379 GOLGA6L6A8MZA4 724 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 PPP1R3GB7ZBB8 358 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 KLRC4O43908 158 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 PPATQ06203 517 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 MUM1L1Q5H9M0 696 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 CNNM4Q6P4Q7 775 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 RAD54LQ92698 747 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 GJA10Q969M2 543 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 CCDC47Q96A33 483 aaKnown RBP25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 TRERF1Q96PN7 1200 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 TRIM9Q9C026 710 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 HSD3B7Q9H2F3 369 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 SETQ01105 290 aaPredicted RBP25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 TKFCQ3LXA3 575 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 ERMNQ8TAM6 284 aa25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 LARP4BQ92615 738 aaKnown RBP25.63■■□□□ 1.69
SCAMP3-202ENST00000355379 POTECB2RU33 542 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 RHOBTB3O94955 611 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 TPM3P06753 285 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 CCT6AP40227 531 aaKnown RBP25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 FMR1Q06787 632 aaKnown RBP eCLIP25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 CEP55Q53EZ4 464 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 HAUS3Q68CZ6 603 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 NIPA1Q7RTP0 329 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 ERO1BQ86YB8 467 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 SYTL5Q8TDW5 730 aaPredicted RBP25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 COL20A1Q9P218 1284 aa25.62■■□□□ 1.69
SCAMP3-202ENST00000355379 A0A0G2JMZ2 1700 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 MEIS1O00470 390 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 CD44P16070 742 aaKnown RBP25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 KMT5BQ4FZB7 885 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 KCTD17Q8N5Z5 321 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 CYP2W1Q8TAV3 490 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 SLC5A5Q92911 643 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 WNK4Q96J92 1243 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 VAV3Q9UKW4 847 aa25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 ZNF214Q9UL59 606 aaPredicted RBP25.61■■□□□ 1.69
SCAMP3-202ENST00000355379 SPDYE5A6NIY4 337 aa25.6■■□□□ 1.69
SCAMP3-202ENST00000355379 CXCL11O14625 94 aa25.6■■□□□ 1.69
SCAMP3-202ENST00000355379 HOXA7P31268 230 aaPredicted RBP25.6■■□□□ 1.69
SCAMP3-202ENST00000355379 MXRA8Q9BRK3 442 aa25.6■■□□□ 1.69
SCAMP3-202ENST00000355379 RNF146Q9NTX7 359 aa25.6■■□□□ 1.69
SCAMP3-202ENST00000355379 BCRP11274 1271 aa25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 MCM6Q14566 821 aa25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 ECM1Q16610 540 aa25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 ARMC9Q7Z3E5 817 aa25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 PROCA1Q8NCQ7 364 aaPredicted RBP25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 MED15Q96RN5 788 aa25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 FANCLQ9NW38 375 aa25.59■■□□□ 1.69
SCAMP3-202ENST00000355379 A0A0G2JLL6 359 aaPredicted RBP25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 PVALEFA0A1B0GWK0 134 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 SPDYE16A6NNV3 312 aaPredicted RBP25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 RPS6P62753 249 aaKnown RBP25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 TMEM132BQ14DG7 1078 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 EAPPQ56P03 285 aaPredicted RBP25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 SPATA1Q5VX52 437 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 PCNX4Q63HM2 1172 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 RNF207Q6ZRF8 634 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 PRRT2Q7Z6L0 340 aaPredicted RBP25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 ZSCAN30Q86W11 494 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 ELP3Q9H9T3 547 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 HOMER2Q9NSB8 354 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 NFE2L3Q9Y4A8 694 aa25.58■■□□□ 1.69
SCAMP3-202ENST00000355379 ESPNB1AK53 854 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms