RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ZNF212Q9UDV6 495 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 CEP170Q5SW79 1584 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 DDAH1O94760 285 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 ATP8B2P98198 1209 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 RIN3Q8TB24 985 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 DAPK3O43293 454 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 SLC44A4Q53GD3 710 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 FAM9CQ8IZT9 166 aa8.68□□□□□ -1.02
HTT-201ENST00000355072 SYCE1LA8MT33 242 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 DMP1Q13316 513 aaPredicted RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 CD209Q9NNX6 404 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 SUN2Q9UH99 717 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 POLR2DO15514 142 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 GAP43P17677 238 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 RAB15P59190 212 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 BYSLQ13895 437 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 TRIM62Q9BVG3 475 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 EPN3Q9H201 632 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 OLFML3Q9NRN5 406 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 VWA3AA6NCI4 1184 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 ABLIM1O14639 778 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 MRPL28Q13084 256 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 RMDN1Q96DB5 314 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 DISP3Q9P2K9 1392 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 EXOC1LA0A1B0GW35 172 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 NLRP11P59045 1033 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 PRPSAP1Q14558 356 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 STAT2P52630 851 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 RASGRF1Q13972 1273 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 CCDC80Q76M96 950 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 KPNA7A9QM74 516 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 CLASP2O75122 1294 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 GSNP06396 782 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 PATL1Q86TB9 770 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 C2CD5Q86YS7 1000 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 ZSCAN29Q8IWY8 852 aaPredicted RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 DDI1Q8WTU0 396 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 HNRNPLLQ8WVV9 542 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 CHD4Q14839 1912 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 MARCKSP29966 332 aaPredicted RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 ANAPC5Q9UJX4 755 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 SRRM3A6NNA2 597 aaPredicted RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.67□□□□□ -1.02
HTT-201ENST00000355072 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 AGGF1Q8N302 714 aaeCLIP8.67□□□□□ -1.021e-8■■■■■ 118.9
HTT-201ENST00000355072 SH3GLB2Q9NR46 395 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 UVRAGQ9P2Y5 699 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 CCT2P78371 535 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 CRLF3Q8IUI8 442 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 TADA1Q96BN2 335 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 CABP1Q9NZU7 370 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 BHMT2Q9H2M3 363 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 MRPL46Q9H2W6 279 aaKnown RBP8.67□□□□□ -1.02
HTT-201ENST00000355072 C1orf112Q9NSG2 853 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 STMN3Q9NZ72 180 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 PLB1Q6P1J6 1458 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 O00370 1275 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 TRIM50Q86XT4 487 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 DHX58Q96C10 678 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 C19orf44Q9H6X5 657 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 MROH5Q6ZUA9 1318 aa8.67□□□□□ -1.02
HTT-201ENST00000355072 AKNAD1Q5T1N1 836 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 GOLPH3LQ9H4A5 285 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 MORC3Q14149 939 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 ZMYND12Q9H0C1 365 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 ING2Q9H160 280 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 DENND2AQ9ULE3 1009 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 ZMYM6O95789 1325 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 MED7O43513 233 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 BNC1Q01954 994 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 CDC27P30260 824 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 DSG1Q02413 1049 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 ENOX1Q8TC92 643 aaKnown RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 A2ML1A8K2U0 1454 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 ESRRAP11474 423 aaPredicted RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 UAP1Q16222 522 aaPredicted RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 CEP95Q96GE4 821 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 APOBEC2Q9Y235 224 aaKnown RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 LRIG3Q6UXM1 1119 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 NELFBQ8WX92 580 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 EML4Q9HC35 981 aaKnown RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 STRIP2Q9ULQ0 834 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 USP32Q8NFA0 1604 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 SETBP1Q9Y6X0 1596 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 PARP9Q8IXQ6 854 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 GCOM2Q9BZD3 368 aaPredicted RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 TRIM8Q9BZR9 551 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 CNGB3Q9NQW8 809 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 ATP7AQ04656 1500 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 SMIM23A6NLE4 172 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 417.7 ms