RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 LTN1O94822 1766 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 GSTTP1A0A1W2PQM5 241 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CCDC172P0C7W6 258 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 PLA2G4BP0C869 781 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 DDIT3P35638 169 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 ARMC9Q7Z3E5 817 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 SLIT3O75094 1523 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CASP14P31944 242 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 PPP1R2P41236 205 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 PPP4CP60510 307 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 LDHDQ86WU2 507 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 TRIML1Q8N9V2 468 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 BANK1Q8NDB2 785 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 ELP3Q9H9T3 547 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 NEFHP12036 1026 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 RDXP35241 583 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 KLHL30Q0D2K2 578 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 SLC16A10Q8TF71 515 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 MTA3Q9BTC8 594 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 MAGEA1P43355 309 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 LMAN1P49257 510 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 DDX12PQ92771 950 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 AK8Q96MA6 479 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 LAD1O00515 517 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 ARMCX5Q6P1M9 558 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 ZNF215Q9UL58 517 aaPredicted RBP13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
PCDHB11-201ENST00000354757 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 CTAGE15A4D2H0 777 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 GOLGA6L10A6NI86 522 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 HNRNPDLO14979 420 aaKnown RBP13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 CTAGE8P0CG41 777 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 ABCB4P21439 1286 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 POLR2FP61218 127 aaKnown RBP13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 CTAGE6Q86UF2 777 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 CTAGE4Q8IX94 777 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 ARHGAP6O43182 974 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 CD19P15391 556 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 COPB1P53618 953 aaKnown RBP13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 GABPB1Q06547 395 aaPredicted RBP13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 FAM151AQ8WW52 585 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 SERPINA10Q9UK55 444 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 PRR12Q9ULL5 1215 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 DESP17661 470 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 PHF20Q9BVI0 1012 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 MTFR1LQ9H019 292 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 HACL1Q9UJ83 578 aa13.63□□□□□ -0.23
PCDHB11-201ENST00000354757 RIC1Q4ADV7 1423 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 INPP5BP32019 993 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 WDR44Q5JSH3 913 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 LRRC8AQ8IWT6 810 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 AK9Q5TCS8 1911 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 TNFAIP3P21580 790 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 LIG4P49917 911 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 CYP26C1Q6V0L0 522 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 EHBP1Q8NDI1 1231 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 OR8K1Q8NGG5 319 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 P2RX5Q93086 422 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 BCCIPQ9P287 314 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 TRPC3Q13507 836 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 MTMR1Q13613 665 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 PDXDC2PQ6P474 469 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 SLC30A10Q6XR72 485 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 C10orf67Q8IYJ2 551 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 PPM1KQ8N3J5 372 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 POMGNT1Q8WZA1 660 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 CARD6Q9BX69 1037 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 WDR11Q9BZH6 1224 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
PCDHB11-201ENST00000354757 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 NEBLO76041 1014 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 OSTNP61366 133 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 ASIC2Q16515 512 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 SLC9C1Q4G0N8 1177 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 CLEC17AQ6ZS10 378 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 KCNB2Q92953 911 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms