RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FAM193AP78312 1265 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 SLF2Q8IX21 1173 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 CCDC170Q8IYT3 715 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 RAD54LQ92698 747 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 PAPD7Q5XG87 772 aaKnown RBP21.73■■□□□ 1.07
COL13A1-201ENST00000354547 TXLNBQ8N3L3 684 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 EHBP1Q8NDI1 1231 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 CRACR2AQ9BSW2 395 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L10C9JJH3 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 NT5C2P49902 561 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 VAV2P52735 878 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 CACNA2D4Q7Z3S7 1137 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 ZSCAN29Q8IWY8 852 aaPredicted RBP21.72■■□□□ 1.07
COL13A1-201ENST00000354547 RAB34Q9BZG1 259 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 DDX25Q9UHL0 483 aaKnown RBP21.72■■□□□ 1.07
COL13A1-201ENST00000354547 GYS1P13807 737 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 KIF11P52732 1056 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 NAP1L1P55209 391 aaKnown RBP21.72■■□□□ 1.07
COL13A1-201ENST00000354547 TUBB4BP68371 445 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 APBA1Q02410 837 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 TAF3Q5VWG9 929 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 PCDHA13Q9Y5I0 950 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 NPHP3-ACAD11A0A0J9YXS1 232 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L15C9J2P7 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L13C9JLJ4 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L11C9JVI0 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L18D6R9N7 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L22D6RA61 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L17D6RBQ6 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L19D6RCP7 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L20D6RJB6 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 TRAF5O00463 557 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L24Q0WX57 530 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP17L6PQ6QN14 398 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 USP40Q9NVE5 1235 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 EHD2Q9NZN4 543 aa21.72■■□□□ 1.07
COL13A1-201ENST00000354547 FXR2P51116 673 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL13A1-201ENST00000354547 ARID5AQ03989 594 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 TDRD12Q587J7 1177 aaKnown RBP21.71■■□□□ 1.07
COL13A1-201ENST00000354547 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 STK17AQ9UEE5 414 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 SIK3Q9Y2K2 1263 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 E9PMD0 336 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 CACNB3P54284 484 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 MAN2A1Q16706 1144 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 SHROOM1Q2M3G4 852 aaPredicted RBP21.71■■□□□ 1.07
COL13A1-201ENST00000354547 ASPRV1Q53RT3 343 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 RIN2Q8WYP3 895 aaPredicted RBP21.71■■□□□ 1.07
COL13A1-201ENST00000354547 PLAGL2Q9UPG8 496 aa21.71■■□□□ 1.07
COL13A1-201ENST00000354547 BUB1O43683 1085 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 USO1O60763 962 aaKnown RBP21.7■■□□□ 1.06
COL13A1-201ENST00000354547 CCDC40Q4G0X9 1142 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 C15orf52Q6ZUT6 534 aaKnown RBP21.7■■□□□ 1.06
COL13A1-201ENST00000354547 COG1Q8WTW3 980 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 SERPINB13Q9UIV8 391 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 MYH10P35580 1976 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 ESYT2A0FGR8 921 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 NCK2O43639 380 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 TTLL1O95922 423 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 MYBL2P10244 700 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 GFPT1Q06210 699 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-201ENST00000354547 EZH2Q15910 746 aaKnown RBP21.7■■□□□ 1.06
COL13A1-201ENST00000354547 ZSCAN26Q16670 478 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 CERS3Q8IU89 383 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 TBC1D22AQ8WUA7 517 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 PCDHA12Q9UN75 941 aa21.7■■□□□ 1.06
COL13A1-201ENST00000354547 TOM1O60784 492 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 CAPN2P17655 700 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 PPP1R2P41236 205 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 TMC4Q7Z404 712 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 GUF1Q8N442 669 aaKnown RBP21.69■■□□□ 1.06
COL13A1-201ENST00000354547 CERS5Q8N5B7 392 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 GAKO14976 1311 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 PVALEFA0A1B0GWK0 134 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 SNAP25P60880 206 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 ZNF543Q08ER8 600 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 TCP10Q12799 353 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 SKIDA1Q1XH10 827 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 NFRKBQ6P4R8 1299 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 HAS1Q92839 578 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 TRIM34Q9BYJ4 488 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 PLEKHA4Q9H4M7 779 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 PSTPIP2Q9H939 334 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 KIAA1024Q9UPX6 916 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 RASSF7Q02833 373 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 CKAP4Q07065 602 aaKnown RBP21.69■■□□□ 1.06
COL13A1-201ENST00000354547 CRY2Q49AN0 593 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 WDR93Q6P2C0 686 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 FAM163AQ96GL9 167 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-201ENST00000354547 TSG101Q99816 390 aa21.69■■□□□ 1.06
COL13A1-201ENST00000354547 TACC1O75410 805 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 SMARCA1P28370 1054 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 COASYQ13057 564 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 SEMA3FQ13275 785 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 CUL5Q93034 780 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 EXOC4Q96A65 974 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 POLD4Q9HCU8 107 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 PANK4Q9NVE7 773 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms