RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 HEATR4Q86WZ0 1026 aa8.68□□□□□ -1.02
SCN8A-201ENST00000354534 NELFCDQ8IXH7 590 aa8.68□□□□□ -1.02
SCN8A-201ENST00000354534 ARHGAP45Q92619 1136 aa8.68□□□□□ -1.02
SCN8A-201ENST00000354534 CDC40O60508 579 aaKnown RBP eCLIP8.68□□□□□ -1.02
SCN8A-201ENST00000354534 CARD9Q9H257 536 aa8.68□□□□□ -1.02
SCN8A-201ENST00000354534 ADA2Q9NZK5 511 aa8.68□□□□□ -1.02
SCN8A-201ENST00000354534 MTRF1O75570 445 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 EIF6P56537 245 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 HERC4Q5GLZ8 1057 aaPredicted RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 CAPRIN2Q6IMN6 1127 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 RRM2BQ7LG56 351 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 AGBL1Q96MI9 1066 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 DNM3Q9UQ16 869 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 AKIRIN2Q53H80 203 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ANO5Q75V66 913 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 PPP1R42Q7Z4L9 355 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 DDX17Q92841 729 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 MTRQ99707 1265 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 RHBDL2Q9NX52 303 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 AK2P54819 239 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 RFX6Q8HWS3 928 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 MAGEB6Q8N7X4 407 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 NUDCD1Q96RS6 583 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ZBTB18Q99592 522 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 HACE1Q8IYU2 909 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 USP26Q9BXU7 913 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 SUN2Q9UH99 717 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 PCDHB13Q9Y5F0 798 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 PMLP29590 882 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 PDE6CP51160 858 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 DEFA1P59665 94 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 DEFA3P59666 94 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 NBPF5PQ86XG9 351 aaPredicted RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 SRRM1Q8IYB3 904 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ARHGAP18Q8N392 663 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 FTOQ9C0B1 505 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 KCNH3Q9ULD8 1083 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ZMYND10O75800 440 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 MAGOHBQ96A72 148 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ARIH2O95376 493 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 PLS3P13797 630 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 DNM2P50570 870 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 POSTNQ15063 836 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ALS2CLQ60I27 953 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 SYT2Q8N9I0 419 aaPredicted RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 TTC25Q96NG3 672 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 SLCO1A2P46721 670 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 CYTH1Q15438 398 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 RTL3Q8N8U3 475 aaKnown RBP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 ZNF202O95125 648 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 MT-ND3P03897 115 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 NSUN2Q08J23 767 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCN8A-201ENST00000354534 TMC5Q6UXY8 1006 aa8.67□□□□□ -1.02
SCN8A-201ENST00000354534 KRT6AP02538 564 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 KRT6BP04259 564 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 KRT6CP48668 564 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 KPNA2P52292 529 aaKnown RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 PIK3AP1Q6ZUJ8 805 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 METTL13Q8N6R0 699 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 ESYT1Q9BSJ8 1104 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 DMAP1Q9NPF5 467 aaPredicted RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 NDE1Q9NXR1 346 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 CCDC61Q9Y6R9 512 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 TYW5A2RUC4 315 aaKnown RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 ACTN1P12814 892 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 ITGAXP20702 1163 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 KIF23Q02241 960 aaPredicted RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 CNGA3Q16281 694 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 ARHGAP17Q68EM7 881 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 DESI2Q9BSY9 194 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 C10orf88Q9H8K7 445 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 CPSF3Q9UKF6 684 aaKnown RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 CCHCR1Q8TD31 782 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 TRAF3IP3Q9Y228 551 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 TOMM70O94826 608 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 MMEP08473 750 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 ATP2B4P23634 1241 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 CALCRLQ16602 461 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 SLC9C2Q5TAH2 1124 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 KLHL24Q6TFL4 600 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 NARS2Q96I59 477 aaKnown RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 MMTAG2Q9BU76 263 aaKnown RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 MYO10Q9HD67 2058 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 DRP2Q13474 957 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 CDC37Q16543 378 aaPredicted RBP8.66□□□□□ -1.02
SCN8A-201ENST00000354534 DTNBP1Q96EV8 351 aa8.66□□□□□ -1.02
SCN8A-201ENST00000354534 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms