RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 TMEM191BP0C7N4 346 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 MIS18BP1Q6P0N0 1132 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 FAM49AQ9H0Q0 323 aaPredicted RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 RPAP3Q9H6T3 665 aaPredicted RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 TLDC2A0PJX2 215 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 STAT1P42224 750 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 PAGE5Q96GU1 130 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 MAK16Q9BXY0 300 aaKnown RBP15.09■□□□□ 0.01
SMC6-201ENST00000351948 MTMR4Q9NYA4 1195 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 RASAL2Q9UJF2 1139 aa15.09■□□□□ 0.01
SMC6-201ENST00000351948 STAT3P40763 770 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 ARHGAP4P98171 946 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0.01
SMC6-201ENST00000351948 MTMR1Q13613 665 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 HS1BP3Q53T59 392 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 ZBTB33Q86T24 672 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 OR8K1Q8NGG5 319 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 HOXC10Q9NYD6 342 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 RFX7Q2KHR2 1363 aa15.08■□□□□ 0.01
SMC6-201ENST00000351948 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
SMC6-201ENST00000351948 LIN9Q5TKA1 542 aa15.08■□□□□ 0
SMC6-201ENST00000351948 TSGA10Q9BZW7 698 aa15.08■□□□□ 0
SMC6-201ENST00000351948 GDAQ9Y2T3 454 aa15.08■□□□□ 0
SMC6-201ENST00000351948 DDIT3P35638 169 aa15.08■□□□□ 0
SMC6-201ENST00000351948 GBP6Q6ZN66 633 aa15.08■□□□□ 0
SMC6-201ENST00000351948 NLRP4Q96MN2 994 aa15.08■□□□□ 0
SMC6-201ENST00000351948 NOX5Q96PH1 765 aa15.08■□□□□ 0
SMC6-201ENST00000351948 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
SMC6-201ENST00000351948 BCL9O00512 1426 aa15.08■□□□□ 0
SMC6-201ENST00000351948 CEP104O60308 925 aa15.08■□□□□ 0
SMC6-201ENST00000351948 GNA14O95837 355 aa15.08■□□□□ 0
SMC6-201ENST00000351948 NFIAQ12857 509 aa15.08■□□□□ 0
SMC6-201ENST00000351948 SGMS1Q86VZ5 419 aa15.08■□□□□ 0
SMC6-201ENST00000351948 PAIP2Q9BPZ3 127 aaKnown RBP15.08■□□□□ 0
SMC6-201ENST00000351948 IMPACTQ9P2X3 320 aa15.08■□□□□ 0
SMC6-201ENST00000351948 HERC5Q9UII4 1024 aaKnown RBP15.08■□□□□ 0
SMC6-201ENST00000351948 FEM1BQ9UK73 627 aa15.08■□□□□ 0
SMC6-201ENST00000351948 PXDNLA1KZ92 1463 aa15.07■□□□□ 0
SMC6-201ENST00000351948 COPB1P53618 953 aaKnown RBP15.07■□□□□ 0
SMC6-201ENST00000351948 ANTXR2P58335 489 aa15.07■□□□□ 0
SMC6-201ENST00000351948 PRPF38AQ8NAV1 312 aaKnown RBP15.07■□□□□ 0
SMC6-201ENST00000351948 GOLGA8IPA6NC78 632 aa15.07■□□□□ 0
SMC6-201ENST00000351948 GOLGA8JA6NMD2 632 aa15.07■□□□□ 0
SMC6-201ENST00000351948 HSF2BPO75031 334 aa15.07■□□□□ 0
SMC6-201ENST00000351948 KIF4AO95239 1232 aa15.07■□□□□ 0
SMC6-201ENST00000351948 NDUFB10O96000 172 aa15.07■□□□□ 0
SMC6-201ENST00000351948 STYK1Q6J9G0 422 aa15.07■□□□□ 0
SMC6-201ENST00000351948 CARD6Q9BX69 1037 aa15.07■□□□□ 0
SMC6-201ENST00000351948 E9PMD0 336 aa15.07■□□□□ 0
SMC6-201ENST00000351948 ZRSR2Q15696 482 aaKnown RBP15.07■□□□□ 0
SMC6-201ENST00000351948 IGDCC4Q8TDY8 1250 aa15.07■□□□□ 0
SMC6-201ENST00000351948 P2RX5Q93086 422 aa15.07■□□□□ 0
SMC6-201ENST00000351948 SH2D3AQ9BRG2 576 aa15.07■□□□□ 0
SMC6-201ENST00000351948 DISC1Q9NRI5 854 aa15.07■□□□□ 0
SMC6-201ENST00000351948 C1orf112Q9NSG2 853 aa15.07■□□□□ 0
SMC6-201ENST00000351948 BARHL2Q9NY43 387 aa15.07■□□□□ 0
SMC6-201ENST00000351948 BUB1O43683 1085 aa15.07■□□□□ 0
SMC6-201ENST00000351948 SRGNP10124 158 aa15.07■□□□□ 0
SMC6-201ENST00000351948 EVCP57679 992 aa15.07■□□□□ 0
SMC6-201ENST00000351948 CUL4BQ13620 913 aa15.07■□□□□ 0
SMC6-201ENST00000351948 DNAJC21Q5F1R6 531 aaKnown RBP15.07■□□□□ 0
SMC6-201ENST00000351948 FMNL3Q8IVF7 1028 aa15.07■□□□□ 0
SMC6-201ENST00000351948 CDHR1Q96JP9 859 aa15.07■□□□□ 0
SMC6-201ENST00000351948 KMT5BQ4FZB7 885 aa15.06■□□□□ 0
SMC6-201ENST00000351948 NACA2Q9H009 215 aa15.06■□□□□ 0
SMC6-201ENST00000351948 PNMA3Q9UL41 463 aa15.06■□□□□ 0
SMC6-201ENST00000351948 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
SMC6-201ENST00000351948 LRRN2O75325 713 aa15.06■□□□□ 0
SMC6-201ENST00000351948 EZRP15311 586 aaKnown RBP15.06■□□□□ 0
SMC6-201ENST00000351948 RASA1P20936 1047 aa15.06■□□□□ 0
SMC6-201ENST00000351948 CASP14P31944 242 aa15.06■□□□□ 0
SMC6-201ENST00000351948 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
SMC6-201ENST00000351948 NLRP7Q8WX94 980 aa15.06■□□□□ 0
SMC6-201ENST00000351948 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
SMC6-201ENST00000351948 TNS2Q63HR2 1409 aa15.06■□□□□ 0
SMC6-201ENST00000351948 POTEB3A0JP26 581 aa15.06■□□□□ 0
SMC6-201ENST00000351948 POTECB2RU33 542 aa15.06■□□□□ 0
SMC6-201ENST00000351948 POTEBQ6S5H4 581 aa15.06■□□□□ 0
SMC6-201ENST00000351948 TICAM2Q86XR7 235 aa15.06■□□□□ 0
SMC6-201ENST00000351948 KLHL7Q8IXQ5 586 aa15.06■□□□□ 0
SMC6-201ENST00000351948 MRRFQ96E11 262 aaKnown RBP15.06■□□□□ 0
SMC6-201ENST00000351948 PRMT6Q96LA8 375 aaPredicted RBP15.06■□□□□ 0
SMC6-201ENST00000351948 GOLPH3LQ9H4A5 285 aa15.06■□□□□ 0
SMC6-201ENST00000351948 RRAGDQ9NQL2 400 aaPredicted RBP15.06■□□□□ 0
SMC6-201ENST00000351948 EMILIN3Q9NT22 766 aa15.06■□□□□ 0
SMC6-201ENST00000351948 MTUS1Q9ULD2 1270 aa15.06■□□□□ 0
SMC6-201ENST00000351948 TNNC2P02585 160 aa15.06■□□□□ 0
SMC6-201ENST00000351948 ATP1A3P13637 1013 aa15.06■□□□□ 0
SMC6-201ENST00000351948 EXOC3L4Q17RC7 722 aa15.06■□□□□ 0
SMC6-201ENST00000351948 LDHDQ86WU2 507 aa15.06■□□□□ 0
SMC6-201ENST00000351948 DEFB129Q9H1M3 183 aa15.06■□□□□ 0
SMC6-201ENST00000351948 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
SMC6-201ENST00000351948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.06■□□□□ 0
SMC6-201ENST00000351948 ABL1P00519 1130 aa15.05■□□□□ 0
SMC6-201ENST00000351948 PEX3P56589 373 aa15.05■□□□□ 0
SMC6-201ENST00000351948 KCNG1Q9UIX4 513 aa15.05■□□□□ 0
SMC6-201ENST00000351948 CUEDC2Q9H467 287 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms