RNA–Protein interactions for RNA: ENST00000351748.7

TNFRSF25-202, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF25, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-202ENST00000351748 DDX41Q9UJV9 622 aaKnown RBP26.34■■□□□ 1.81
TNFRSF25-202ENST00000351748 SORBS3O60504 671 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 EIF3JO75822 258 aaKnown RBP26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 CHMP4BP1P59074 171 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 ZNF697Q5TEC3 545 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 NFXL1Q6ZNB6 911 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 SRBD1Q8N5C6 995 aaKnown RBP26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 CTCFLQ8NI51 663 aaPredicted RBP26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 GPKOWQ92917 476 aaPredicted RBP eCLIP26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 VWCEQ96DN2 955 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 SCLYQ96I15 445 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 TMEM87BQ96K49 555 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 SPZ1Q9BXG8 430 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 STXBP5LQ9Y2K9 1186 aa26.33■■□□□ 1.81
TNFRSF25-202ENST00000351748 GCOM1H8Y6P7 765 aaPredicted RBP26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 RBAK-RBAKDNI3L0D1 243 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 POLR2MP0CAP2 368 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 BRDTQ58F21 947 aaPredicted RBP26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 TCEANC2Q96MN5 208 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 MAP3K14Q99558 947 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 MTA3Q9BTC8 594 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 SEZ6LQ9BYH1 1024 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 IL23AQ9NPF7 189 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 MRVI1Q9Y6F6 885 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 CDH23Q9H251 3354 aa26.32■■□□□ 1.8
TNFRSF25-202ENST00000351748 CCDC69A6NI79 296 aa26.31■■□□□ 1.8
TNFRSF25-202ENST00000351748 GRXCR1A8MXD5 290 aa26.31■■□□□ 1.8
TNFRSF25-202ENST00000351748 RASIP1Q5U651 963 aa26.31■■□□□ 1.8
TNFRSF25-202ENST00000351748 RASEFQ8IZ41 740 aa26.31■■□□□ 1.8
TNFRSF25-202ENST00000351748 KAT2BQ92831 832 aa26.31■■□□□ 1.8
TNFRSF25-202ENST00000351748 MAP3K20Q9NYL2 800 aaKnown RBP26.31■■□□□ 1.8
TNFRSF25-202ENST00000351748 hCG_1642624A0A1W2PR95 340 aa26.3■■□□□ 1.8
TNFRSF25-202ENST00000351748 VSIG10LQ86VR7 867 aa26.3■■□□□ 1.8
TNFRSF25-202ENST00000351748 SEMA6BQ9H3T3 888 aa26.3■■□□□ 1.8
TNFRSF25-202ENST00000351748 CXXC1Q9P0U4 656 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF25-202ENST00000351748 KPNA6O60684 536 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 CDC45O75419 566 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 KIF5BP33176 963 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 LIFRP42702 1097 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 SP2Q02086 613 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 ADCK5Q3MIX3 580 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 NFRKBQ6P4R8 1299 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 TET1Q8NFU7 2136 aa26.29■■□□□ 1.8
TNFRSF25-202ENST00000351748 ZNF286BP0CG31 522 aa26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 PBX2P40425 430 aa26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 PSRC1Q6PGN9 363 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 SAMD3Q8N6K7 520 aa26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 RRP36Q96EU6 259 aaKnown RBP26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 CTAGE1Q96RT6 745 aa26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 CDX2Q99626 313 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 BCAS3Q9H6U6 928 aa26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 FRMPD4Q14CM0 1322 aa26.28■■□□□ 1.8
TNFRSF25-202ENST00000351748 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 DNAJB2P25686 324 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 CCND2P30279 289 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 MRPS9P82933 396 aaKnown RBP26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 TRAF1Q13077 416 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 USP17L6PQ6QN14 398 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 OTOP2Q7RTS6 562 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 MICU3Q86XE3 530 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 EMID1Q96A84 441 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 CCDC136Q96JN2 1154 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 PTPRSQ13332 1948 aa26.27■■□□□ 1.8
TNFRSF25-202ENST00000351748 SUPT20HL2P0C7V6 817 aa26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 UBA1P22314 1058 aaKnown RBP26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 GDF6Q6KF10 455 aaPredicted RBP26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 DHX37Q8IY37 1157 aaKnown RBP26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 TMTC2Q8N394 836 aa26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 CCDC82Q8N4S0 544 aa26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 HERVK_113Q902F9 699 aa26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 SLC12A7Q9Y666 1083 aa26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 EYSQ5T1H1 3165 aa26.26■■□□□ 1.79
TNFRSF25-202ENST00000351748 GGPS1O95749 300 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 SMARCA1P28370 1054 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 HSDL1Q3SXM5 330 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 MYSM1Q5VVJ2 828 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 TMTC3Q6ZXV5 915 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 SGMS1Q86VZ5 419 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 PPTC7Q8NI37 304 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 MYLIPQ8WY64 445 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 NEK1Q96PY6 1258 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 BRPF3Q9ULD4 1205 aa26.25■■□□□ 1.79
TNFRSF25-202ENST00000351748 MEIS2O14770 477 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 FGBP02675 491 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 CASTP20810 708 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 EXOSC10Q01780 885 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 SEMA3FQ13275 785 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 LAMC2Q13753 1193 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 DGKDQ16760 1214 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 CELF3Q5SZQ8 465 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 RNF20Q5VTR2 975 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 FANCBQ8NB91 859 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 LZTS2Q9BRK4 669 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 PBX4Q9BYU1 374 aa26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 SEC63Q9UGP8 760 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-202ENST00000351748 CALM1P0DP23 149 aa26.23■■□□□ 1.79
TNFRSF25-202ENST00000351748 CALM2P0DP24 149 aa26.23■■□□□ 1.79
TNFRSF25-202ENST00000351748 CALM3P0DP25 149 aa26.23■■□□□ 1.79
TNFRSF25-202ENST00000351748 PSEN2P49810 448 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms