RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SH2D4AQ9H788 454 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 EPB41L5Q9HCM4 733 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 DNM1LO00429 736 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 USO1O60763 962 aaKnown RBP20.62■□□□□ 0.89
SCARF1-202ENST00000348987 DDAH1O94760 285 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 TCP1P17987 556 aaKnown RBP20.62■□□□□ 0.89
SCARF1-202ENST00000348987 PAFAH1B1P43034 410 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 TBC1D8BQ0IIM8 1120 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 EMC10Q5UCC4 262 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 LRCH2Q5VUJ6 765 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 CYFIP2Q96F07 1278 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 ATP6V1G3Q96LB4 118 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 TUBGCP2Q9BSJ2 902 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 EXOC1Q9NV70 894 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
SCARF1-202ENST00000348987 FAM205AQ6ZU69 1335 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 USP17L8P0C7I0 530 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 MRPL12P52815 198 aaKnown RBP20.62■□□□□ 0.89
SCARF1-202ENST00000348987 GUCY2DQ02846 1103 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 BARGINQ6ZT62 677 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 IFT20Q8IY31 132 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 HAUS2Q9NVX0 235 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 MYH13Q9UKX3 1938 aa20.62■□□□□ 0.89
SCARF1-202ENST00000348987 CALM1P0DP23 149 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 CALM2P0DP24 149 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 CALM3P0DP25 149 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 ITGB3BPQ13352 177 aaPredicted RBP20.61■□□□□ 0.89
SCARF1-202ENST00000348987 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 TEX11Q8IYF3 940 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 OSBPL7Q9BZF2 842 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 PCDHA13Q9Y5I0 950 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 GOLGA6L7A0A1B0GV03 622 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 TSPY2A6NKD2 308 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 STAG2Q8N3U4 1231 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 SLC24A3Q9HC58 644 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 GGA2Q9UJY4 613 aa20.61■□□□□ 0.89
SCARF1-202ENST00000348987 MYH10P35580 1976 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 TMCO5BA8MYB1 307 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 GNPATO15228 680 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 HEXIM1O94992 359 aaKnown RBP20.6■□□□□ 0.89
SCARF1-202ENST00000348987 BMP15O95972 392 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 ANKRD13CQ8N6S4 541 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 KCNG1Q9UIX4 513 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 TPX2Q9ULW0 747 aaKnown RBP20.6■□□□□ 0.89
SCARF1-202ENST00000348987 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 ORC4O43929 436 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
SCARF1-202ENST00000348987 DRP2Q13474 957 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 TRADDQ15628 312 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 PFKFB3Q16875 520 aaPredicted RBP20.6■□□□□ 0.89
SCARF1-202ENST00000348987 NUP58Q9BVL2 599 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 THAP9Q9H5L6 903 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 GDF3Q9NR23 364 aa20.6■□□□□ 0.89
SCARF1-202ENST00000348987 PPP1R12AO14974 1030 aaPredicted RBP20.59■□□□□ 0.89
SCARF1-202ENST00000348987 CLNS1AP54105 237 aaKnown RBP20.59■□□□□ 0.89
SCARF1-202ENST00000348987 MAATS1Q7Z4T9 603 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 DYNLL2Q96FJ2 89 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 MCM9Q9NXL9 1143 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 SALL4Q9UJQ4 1053 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 HIBADHP31937 336 aaKnown RBP20.59■□□□□ 0.89
SCARF1-202ENST00000348987 SGSM3Q96HU1 749 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 ALS2CR12Q96Q35 445 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 CRNKL1Q9BZJ0 848 aaKnown RBP20.59■□□□□ 0.89
SCARF1-202ENST00000348987 ACTR5Q9H9F9 607 aaPredicted RBP20.59■□□□□ 0.89
SCARF1-202ENST00000348987 IL17RBQ9NRM6 502 aa20.59■□□□□ 0.89
SCARF1-202ENST00000348987 ATP2C2O75185 946 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 ZPR1O75312 459 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 EZRP15311 586 aaKnown RBP20.58■□□□□ 0.89
SCARF1-202ENST00000348987 CRYMQ14894 314 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 CD302Q8IX05 232 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 TLR10Q9BXR5 811 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 ARHGAP20Q9P2F6 1191 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 HMGB1P1B2RPK0 211 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-202ENST00000348987 OPLAHO14841 1288 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 NKRFO15226 690 aaKnown RBP eCLIP20.58■□□□□ 0.89
SCARF1-202ENST00000348987 RPSAP08865 295 aaKnown RBP20.58■□□□□ 0.89
SCARF1-202ENST00000348987 PAK2Q13177 524 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 QPCTQ16769 361 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 SLC35G1Q2M3R5 365 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 C2CD5Q86YS7 1000 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 RETREG2Q8NC44 543 aa20.58■□□□□ 0.89
SCARF1-202ENST00000348987 BACH1O14867 736 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 TOM1O60784 492 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 PCP11498 1178 aaKnown RBP20.57■□□□□ 0.88
SCARF1-202ENST00000348987 DNA2P51530 1060 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 GLE1Q53GS7 698 aaKnown RBP20.57■□□□□ 0.88
SCARF1-202ENST00000348987 CSGALNACT2Q8N6G5 542 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 C4orf32Q8N8J7 132 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 PLAAQ9Y263 795 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 UBAP1LF5GYI3 381 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 KIF11P52732 1056 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 TFAP4Q01664 338 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 ANKRD20A8PQ5CZ79 823 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 PPP4R3AQ6IN85 833 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 PLIN2Q99541 437 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 GMNCA6NCL1 334 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 BUB1O43683 1085 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 STAT6P42226 847 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms