RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 POLR2MP0CAP2 368 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
CLCC1-202ENST00000348264 TRAF1Q13077 416 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 PPIGQ13427 754 aaKnown RBP eCLIP15.38■□□□□ 0.055e-7■■■□□ 14.6
CLCC1-202ENST00000348264 NBPF20Q3BBV1 942 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 RNF20Q5VTR2 975 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 FCHSD1Q86WN1 690 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 CMTR1Q8N1G2 835 aaKnown RBP15.38■□□□□ 0.05
CLCC1-202ENST00000348264 TMTC2Q8N394 836 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 SRBD1Q8N5C6 995 aaKnown RBP15.38■□□□□ 0.05
CLCC1-202ENST00000348264 SAMD3Q8N6K7 520 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
CLCC1-202ENST00000348264 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
CLCC1-202ENST00000348264 DDX41Q9UJV9 622 aaKnown RBP15.38■□□□□ 0.05
CLCC1-202ENST00000348264 ACRP10323 421 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 TMEM240Q5SV17 173 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 FAM109BQ6ICB4 259 aaPredicted RBP15.37■□□□□ 0.05
CLCC1-202ENST00000348264 SGMS1Q86VZ5 419 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 TMEM199Q8N511 208 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 ZFP91Q96JP5 570 aaPredicted RBP15.37■□□□□ 0.05
CLCC1-202ENST00000348264 WNT8AQ9H1J5 351 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 SLC12A7Q9Y666 1083 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 MRVI1Q9Y6F6 885 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 GBF1Q92538 1859 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 FRMPD4Q14CM0 1322 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 TET1Q8NFU7 2136 aa15.37■□□□□ 0.05
CLCC1-202ENST00000348264 KPNA6O60684 536 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 CALM1P0DP23 149 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 CALM2P0DP24 149 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 CALM3P0DP25 149 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 CYP2C9P11712 490 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 SMARCA1P28370 1054 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 GNAQP50148 359 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
CLCC1-202ENST00000348264 FAM47CQ5HY64 1035 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 VSIG10LQ86VR7 867 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
CLCC1-202ENST00000348264 EMID1Q96A84 441 aaPredicted RBP15.36■□□□□ 0.05
CLCC1-202ENST00000348264 FAM161BQ96MY7 647 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 GUCD1Q96NT3 240 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 LZTS2Q9BRK4 669 aa15.36■□□□□ 0.05
CLCC1-202ENST00000348264 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
CLCC1-202ENST00000348264 A0A0C4DFX4 3053 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 hCG_1642624A0A1W2PR95 340 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 CCND2P30279 289 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 CCL23P55773 120 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 EXOSC10Q01780 885 aaKnown RBP15.35■□□□□ 0.05
CLCC1-202ENST00000348264 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 ZNF697Q5TEC3 545 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 NFRKBQ6P4R8 1299 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 APOA5Q6Q788 366 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 USP17L6PQ6QN14 398 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 ZNF365Q70YC5 407 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 KAT2BQ92831 832 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 IL23AQ9NPF7 189 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 PRUNE2Q8WUY3 3088 aa15.35■□□□□ 0.05
CLCC1-202ENST00000348264 CHD9Q3L8U1 2897 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 SORBS3O60504 671 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 ZNF286BP0CG31 522 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 UBA1P22314 1058 aaKnown RBP15.34■□□□□ 0.05
CLCC1-202ENST00000348264 CHMP4BP1P59074 171 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 MRPS9P82933 396 aaKnown RBP15.34■□□□□ 0.05
CLCC1-202ENST00000348264 SP2Q02086 613 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 PSRC1Q6PGN9 363 aaPredicted RBP15.34■□□□□ 0.05
CLCC1-202ENST00000348264 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 PPTC7Q8NI37 304 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 VWCEQ96DN2 955 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 SCLYQ96I15 445 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 TTYH1Q9H313 450 aaPredicted RBP15.34■□□□□ 0.05
CLCC1-202ENST00000348264 CNTNAP5Q8WYK1 1306 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 UNC80Q8N2C7 3258 aa15.34■□□□□ 0.05
CLCC1-202ENST00000348264 MEIS2O14770 477 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 GGPS1O95749 300 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 SUPT20HL2P0C7V6 817 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 HOXD8P13378 290 aaPredicted RBP15.33■□□□□ 0.04
CLCC1-202ENST00000348264 LAMC2Q13753 1193 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 DGKDQ16760 1214 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 CELF3Q5SZQ8 465 aaKnown RBP15.33■□□□□ 0.04
CLCC1-202ENST00000348264 MYSM1Q5VVJ2 828 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 DHX32Q7L7V1 743 aaKnown RBP15.33■□□□□ 0.04
CLCC1-202ENST00000348264 DHX37Q8IY37 1157 aaKnown RBP15.33■□□□□ 0.04
CLCC1-202ENST00000348264 CTAGE1Q96RT6 745 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 CHD7Q9P2D1 2997 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 STXBP5LQ9Y2K9 1186 aa15.33■□□□□ 0.04
CLCC1-202ENST00000348264 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 F2P00734 622 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 CPA1P15085 419 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 CASTP20810 708 aaKnown RBP15.32■□□□□ 0.04
CLCC1-202ENST00000348264 PTPN11Q06124 597 aaPredicted RBP15.32■□□□□ 0.04
CLCC1-202ENST00000348264 SEMA3FQ13275 785 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 KRT32Q14532 448 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 HSDL1Q3SXM5 330 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms