RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 ADCY8P40145 1251 aa20.33■□□□□ 0.85
UBE3C-201ENST00000348165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.33■□□□□ 0.85
UBE3C-201ENST00000348165 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.85
UBE3C-201ENST00000348165 BRIP1Q9BX63 1249 aa20.33■□□□□ 0.85
UBE3C-201ENST00000348165 TDRD3Q9H7E2 651 aaKnown RBP20.33■□□□□ 0.85
UBE3C-201ENST00000348165 CD209Q9NNX6 404 aa20.33■□□□□ 0.85
UBE3C-201ENST00000348165 COX16Q9P0S2 106 aa20.33■□□□□ 0.85
UBE3C-201ENST00000348165 FAM196BA6NMK8 535 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 LPXNO60711 386 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 OSBPP22059 807 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 B4GALNT4Q76KP1 1039 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 CROCCP2Q86T23 111 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 ZNF341Q9BYN7 854 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 BCL2L12Q9HB09 334 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 MAN1B1Q9UKM7 699 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.84
UBE3C-201ENST00000348165 POLR2BP30876 1174 aaKnown RBP20.33■□□□□ 0.84
UBE3C-201ENST00000348165 RESTQ13127 1097 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 PFDN4Q9NQP4 134 aa20.33■□□□□ 0.84
UBE3C-201ENST00000348165 PSMC2P35998 433 aaKnown RBP20.32■□□□□ 0.84
UBE3C-201ENST00000348165 MTMR3Q13615 1198 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 TBC1D10CQ8IV04 446 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 VPS52Q8N1B4 723 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 TCP1P17987 556 aaKnown RBP20.32■□□□□ 0.84
UBE3C-201ENST00000348165 PLCG1P19174 1290 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 PNMA6FA0A0J9YX94 578 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 MTERF2Q49AM1 385 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 CAPN12Q6ZSI9 719 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 SLC44A5Q8NCS7 719 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 STK17AQ9UEE5 414 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 LRRN2O75325 713 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 RNF8O76064 485 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 GAP43P17677 238 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 EEF1GP26641 437 aaKnown RBP20.32■□□□□ 0.84
UBE3C-201ENST00000348165 PPFIA1Q13136 1202 aa20.32■□□□□ 0.84
UBE3C-201ENST00000348165 SRPRBQ9Y5M8 271 aaKnown RBP20.32■□□□□ 0.84
UBE3C-201ENST00000348165 COL15A1P39059 1388 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 ZNF658Q5TYW1 1059 aaPredicted RBP20.31■□□□□ 0.84
UBE3C-201ENST00000348165 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
UBE3C-201ENST00000348165 CCDC160A6NGH7 325 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 CRKP46108 304 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 MESDQ14696 234 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 KAZNQ674X7 775 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 ARMC9Q7Z3E5 817 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 RPS6KC1Q96S38 1066 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 SAMSN1Q9NSI8 373 aaKnown RBP20.31■□□□□ 0.84
UBE3C-201ENST00000348165 CTNNA1P35221 906 aaKnown RBP20.31■□□□□ 0.84
UBE3C-201ENST00000348165 PALM2Q8IXS6 379 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 UHMK1Q8TAS1 419 aaKnown RBP20.31■□□□□ 0.84
UBE3C-201ENST00000348165 MGARPQ8TDB4 240 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 RIC8AQ9NPQ8 531 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 PYCARDQ9ULZ3 195 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 PCDHB4Q9Y5E5 795 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 MFAP3P55082 362 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 VSIG1Q86XK7 387 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 ANKRD42Q8N9B4 389 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 ARHGAP31Q2M1Z3 1444 aa20.31■□□□□ 0.84
UBE3C-201ENST00000348165 CDHR1Q96JP9 859 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 ACCSQ96QU6 501 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 CD2APQ9Y5K6 639 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 MIS18BP1Q6P0N0 1132 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 TMEM179Q6ZVK1 233 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 EMILIN3Q9NT22 766 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 PARP2Q9UGN5 583 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 OAS2P29728 719 aaKnown RBP20.3■□□□□ 0.84
UBE3C-201ENST00000348165 SLC12A2P55011 1212 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 PIM2Q9P1W9 311 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 MYO1FO00160 1098 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 RBL2Q08999 1139 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 ENC1O14682 589 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 AFPP02771 609 aaKnown RBP20.3■□□□□ 0.84
UBE3C-201ENST00000348165 ASNSP08243 561 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 PLA2G4BP0C869 781 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 JPH2Q9BR39 696 aaPredicted RBP20.3■□□□□ 0.84
UBE3C-201ENST00000348165 RIPOR2Q9Y4F9 1068 aa20.3■□□□□ 0.84
UBE3C-201ENST00000348165 IKBKBO14920 756 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 TLR3O15455 904 aaKnown RBP20.29■□□□□ 0.84
UBE3C-201ENST00000348165 GMNNO75496 209 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 MAN2A1Q16706 1144 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 FAM160B2Q86V87 743 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 CABS1Q96KC9 395 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 NBPF3Q9H094 633 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 RGS16O15492 202 aaPredicted RBP20.29■□□□□ 0.84
UBE3C-201ENST00000348165 TFAMQ00059 246 aaKnown RBP20.29■□□□□ 0.84
UBE3C-201ENST00000348165 RETREG2Q8NC44 543 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 STAG1Q8WVM7 1258 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 KRT12Q99456 494 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 ZNF148Q9UQR1 794 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 USP17L5A8MUK1 530 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 NMT2O60551 498 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 CCND2P30279 289 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 ZSCAN26Q16670 478 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 PPP1R16BQ96T49 567 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 TMEM47Q9BQJ4 181 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
UBE3C-201ENST00000348165 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
UBE3C-201ENST00000348165 CEP85LQ5SZL2 805 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms