RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 OGFOD1Q8N543 542 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 P2RX7Q99572 595 aaKnown RBP23.78■■□□□ 1.4
PTPN18-202ENST00000347849 ABCB6Q9NP58 842 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 ZNRF3Q9ULT6 936 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 CTNND2Q9UQB3 1225 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 PCDHA1Q9Y5I3 950 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 FXR1P51114 621 aaKnown RBP eCLIP23.78■■□□□ 1.4
PTPN18-202ENST00000347849 FILIP1LQ4L180 1135 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 ACRBPQ8NEB7 543 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 ACER1Q8TDN7 264 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 CUL5Q93034 780 aa23.78■■□□□ 1.4
PTPN18-202ENST00000347849 PYM1Q9BRP8 204 aaKnown RBP23.78■■□□□ 1.4
PTPN18-202ENST00000347849 MAPK8IP2Q13387 824 aaPredicted RBP23.77■■□□□ 1.4
PTPN18-202ENST00000347849 CALCRLQ16602 461 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 MIGA2Q7L4E1 593 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 KBTBD4Q9NVX7 518 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 RAB21Q9UL25 225 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 SPDYE2Q495Y8 402 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 CDKAL1Q5VV42 579 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 PPP1R18Q6NYC8 613 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 CTAGE1Q96RT6 745 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 PSD3Q9NYI0 1048 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 TMOD2Q9NZR1 351 aa23.77■■□□□ 1.4
PTPN18-202ENST00000347849 PSME4Q14997 1843 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 POTEMA6NI47 508 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 KLRC4O43908 158 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 N4BP1O75113 896 aaKnown RBP23.76■■□□□ 1.39
PTPN18-202ENST00000347849 GYPCP04921 128 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 CCT6AP40227 531 aaKnown RBP23.76■■□□□ 1.39
PTPN18-202ENST00000347849 GRIPAP1Q4V328 841 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 NUDT12Q9BQG2 462 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 PPP1R1BQ9UD71 204 aaPredicted RBP23.76■■□□□ 1.39
PTPN18-202ENST00000347849 L1RE1Q9UN81 338 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 NBPF9Q3BBW0 867 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 NIM1KQ8IY84 436 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 MSANTD4Q8NCY6 345 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 GMCL1P1Q8NEA9 526 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 GOLGA5Q8TBA6 731 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 FAM151AQ8WW52 585 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 PIM2Q9P1W9 311 aa23.76■■□□□ 1.39
PTPN18-202ENST00000347849 POTEB2H3BUK9 544 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 ERLIN1O75477 346 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 MRPL12P52815 198 aaKnown RBP23.75■■□□□ 1.39
PTPN18-202ENST00000347849 CNGA4Q8IV77 575 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 AK8Q96MA6 479 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 HDAC9Q9UKV0 1011 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 PRCPP42785 496 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 SLC20A2Q08357 652 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 USH1GQ495M9 461 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 ZNF658Q5TYW1 1059 aaPredicted RBP23.75■■□□□ 1.39
PTPN18-202ENST00000347849 TSPYL1Q9H0U9 437 aa23.75■■□□□ 1.39
PTPN18-202ENST00000347849 EGFRP00533 1210 aa23.74■■□□□ 1.39
PTPN18-202ENST00000347849 IKQ13123 557 aaPredicted RBP23.74■■□□□ 1.39
PTPN18-202ENST00000347849 CT47A1Q5JQC4 288 aaPredicted RBP23.74■■□□□ 1.39
PTPN18-202ENST00000347849 HAS1Q92839 578 aa23.74■■□□□ 1.39
PTPN18-202ENST00000347849 GMCL1Q96IK5 515 aa23.74■■□□□ 1.39
PTPN18-202ENST00000347849 LCMT1Q9UIC8 334 aa23.74■■□□□ 1.39
PTPN18-202ENST00000347849 CCDC84Q86UT8 332 aaPredicted RBP23.74■■□□□ 1.39
PTPN18-202ENST00000347849 CWC15Q9P013 229 aaKnown RBP23.74■■□□□ 1.39
PTPN18-202ENST00000347849 ACTN2P35609 894 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 VSNL1P62760 191 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 HERC5Q9UII4 1024 aaKnown RBP23.73■■□□□ 1.39
PTPN18-202ENST00000347849 COL2A1P02458 1487 aaPredicted RBP23.73■■□□□ 1.39
PTPN18-202ENST00000347849 MEIS2O14770 477 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 BMP3P12645 472 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 ERVK-24P63145 666 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 GRB10Q13322 594 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 TUBB2AQ13885 445 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 PNMA5Q96PV4 448 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 NAPGQ99747 312 aaPredicted RBP23.73■■□□□ 1.39
PTPN18-202ENST00000347849 TUBB2BQ9BVA1 445 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 LRWD1Q9UFC0 647 aa23.73■■□□□ 1.39
PTPN18-202ENST00000347849 CTAGE15A4D2H0 777 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 TRIM49BA6NDI0 452 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 RNF225M0QZC1 329 aaPredicted RBP23.72■■□□□ 1.39
PTPN18-202ENST00000347849 WNT10BO00744 389 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 N4BP3O15049 544 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 CTAGE8P0CG41 777 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 PMS1P54277 932 aaKnown RBP23.72■■□□□ 1.39
PTPN18-202ENST00000347849 CTAGE6Q86UF2 777 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 CTAGE4Q8IX94 777 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 VPS16Q9H269 839 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 DDX25Q9UHL0 483 aaKnown RBP23.72■■□□□ 1.39
PTPN18-202ENST00000347849 EIF3JO75822 258 aaKnown RBP23.72■■□□□ 1.39
PTPN18-202ENST00000347849 SYDE2Q5VT97 1194 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 TMTC1Q8IUR5 882 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 NELFBQ8WX92 580 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 FAN1Q9Y2M0 1017 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 SRCAPQ6ZRS2 3230 aa23.72■■□□□ 1.39
PTPN18-202ENST00000347849 FXR2P51116 673 aaKnown RBP eCLIP23.71■■□□□ 1.39
PTPN18-202ENST00000347849 PPP4R3AQ6IN85 833 aa23.71■■□□□ 1.39
PTPN18-202ENST00000347849 CCDC51Q96ER9 411 aa23.71■■□□□ 1.39
PTPN18-202ENST00000347849 ZFP91Q96JP5 570 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-202ENST00000347849 GLIS2Q9BZE0 524 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-202ENST00000347849 BLOC1S4Q9NUP1 217 aa23.71■■□□□ 1.39
PTPN18-202ENST00000347849 NFKBIEO00221 500 aa23.71■■□□□ 1.39
PTPN18-202ENST00000347849 TRIM66O15016 1216 aa23.71■■□□□ 1.39
PTPN18-202ENST00000347849 ORC2Q13416 577 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-202ENST00000347849 ZYXQ15942 572 aaKnown RBP23.71■■□□□ 1.39
PTPN18-202ENST00000347849 ECM1Q16610 540 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms