RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 GNA15P30679 374 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CDK8P49336 464 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 RRP1BQ14684 758 aaKnown RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 RGMBQ6NW40 437 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CCDC84Q86UT8 332 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 RASAL3Q86YV0 1011 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 STK11IPQ8N1F8 1099 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 OTUD6BQ8N6M0 293 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 NEK1Q96PY6 1258 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CSRNP1Q96S65 589 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ZSWIM6Q9HCJ5 1215 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 SERPINB13Q9UIV8 391 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 EFR3BQ9Y2G0 817 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ASMTLO95671 621 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 NAT2P11245 290 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 PSMA5P28066 241 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 SHMT1P34896 483 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 NF2P35240 595 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 NT5C2P49902 561 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 CLCN6P51797 869 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 PDE4BQ07343 736 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 COL9A3Q14050 684 aaPredicted RBP5.92□□□□□ -1.46
VCAM1-202ENST00000347652 VGLL4Q14135 290 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 SPECC1Q5M775 1068 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 TATDN1Q6P1N9 297 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 LVRNQ6Q4G3 990 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 HOMER1Q86YM7 354 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 MB21D2Q8IYB1 491 aaPredicted RBP5.92□□□□□ -1.46
VCAM1-202ENST00000347652 NCOA7Q8NI08 942 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 MKL1Q969V6 931 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 JAKMIP1Q96N16 626 aaKnown RBP5.92□□□□□ -1.46
VCAM1-202ENST00000347652 KRT23Q9C075 422 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 DNAJC18Q9H819 358 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 ELP3Q9H9T3 547 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 MRGBPQ9NV56 204 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 TSKSQ9UJT2 592 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 FAM50BQ9Y247 325 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 NDUFB5O43674 189 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 INMTO95050 263 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 HALP42357 657 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 JAG1P78504 1218 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 MTMR2Q13614 643 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 SUPT20HL1Q3ZLR7 823 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 RUFY3Q7L099 469 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 RNF135Q8IUD6 432 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 CHCHD4Q8N4Q1 142 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 SLC44A5Q8NCS7 719 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.92□□□□□ -1.46
VCAM1-202ENST00000347652 TMEM87BQ96K49 555 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 WRNIP1Q96S55 665 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 MKNK2Q9HBH9 465 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 ZNF287Q9HBT7 754 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 SIRPGQ9P1W8 387 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 ZSWIM5Q9P217 1185 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 PFDN2Q9UHV9 154 aa5.92□□□□□ -1.46
VCAM1-202ENST00000347652 HERC5Q9UII4 1024 aaKnown RBP5.92□□□□□ -1.46
VCAM1-202ENST00000347652 PHF20L1A8MW92 1017 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 VSTM5A8MXK1 200 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 B4E1Z4 1266 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 PPP1R12BO60237 982 aaPredicted RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 PRDM1O75626 825 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 SLC10A3P09131 477 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 CASTP20810 708 aaKnown RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 RPS6KB1P23443 525 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 TRDNQ13061 729 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 MTMR1Q13613 665 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 SETDB1Q15047 1291 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 MAP3K11Q16584 847 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 TUBB8Q3ZCM7 444 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 ARSHQ5FYA8 562 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 TMEM92Q6UXU6 159 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 CYB5R4Q7L1T6 521 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 ARMC9Q7Z3E5 817 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 JMYQ8N9B5 988 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 ESR2Q92731 530 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 RELTQ969Z4 430 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 HOOK2Q96ED9 719 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 RETREG1Q9H6L5 497 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 SNCAIPQ9Y6H5 919 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 CPA1P15085 419 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 GLULP15104 373 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 MCM5P33992 734 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 PPM1FP49593 454 aaPredicted RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 ANTXR2P58335 489 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 KIF23Q02241 960 aaPredicted RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 ORC1Q13415 861 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 CBX2Q14781 532 aaPredicted RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 RABEP1Q15276 862 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 RRP12Q5JTH9 1297 aaKnown RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 TRAF7Q6Q0C0 670 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 CCDC81Q6ZN84 652 aa5.91□□□□□ -1.46
VCAM1-202ENST00000347652 RALYLQ86SE5 291 aaKnown RBP5.91□□□□□ -1.46
VCAM1-202ENST00000347652 ZNF444Q8N0Y2 327 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms