RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 PSMB7Q99436 277 aa9.62□□□□□ -0.87
SKAP2-201ENST00000345317 NT5C3AQ9H0P0 336 aa9.62□□□□□ -0.87
SKAP2-201ENST00000345317 CWC15Q9P013 229 aaKnown RBP9.62□□□□□ -0.87
SKAP2-201ENST00000345317 HERC5Q9UII4 1024 aaKnown RBP9.62□□□□□ -0.87
SKAP2-201ENST00000345317 PDS5AQ29RF7 1337 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 MYOCDQ8IZQ8 938 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 SMCR8Q8TEV9 937 aaPredicted RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 JADE2Q9NQC1 790 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 PUF60Q9UHX1 559 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 GAKO14976 1311 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 POLR3GO15318 223 aaPredicted RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 USO1O60763 962 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 ENTPD3O75355 529 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 PLA2G4BP0C869 781 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 CCDC181Q5TID7 509 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 NEK11Q8NG66 645 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 CAPZA3Q96KX2 299 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 CAMKK2Q96RR4 588 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 SRCAPQ6ZRS2 3230 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 DCAF8L1A6NGE4 600 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 IKBKBO14920 756 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 CETN3O15182 167 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 ACTN4O43707 911 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 COPB1P53618 953 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 RBL2Q08999 1139 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 ZNF658Q5TYW1 1059 aaPredicted RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 NLRX1Q86UT6 975 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 CNOT6LQ96LI5 555 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 NAP1L4Q99733 375 aaKnown RBP9.61□□□□□ -0.87
SKAP2-201ENST00000345317 MTFR1LQ9H019 292 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 RABGAP1Q9Y3P9 1069 aa9.61□□□□□ -0.87
SKAP2-201ENST00000345317 USP27XA6NNY8 438 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 FOSP01100 380 aaPredicted RBP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 CYP2W1Q8TAV3 490 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 ENOX1Q8TC92 643 aaKnown RBP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 KIAA1524Q8TCG1 905 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 SLC16A10Q8TF71 515 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 OTUD5Q96G74 571 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 TUBGCP2Q9BSJ2 902 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 NYAP2Q9P242 653 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 USP54Q70EL1 1684 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 TOGARAM1Q9Y4F4 1720 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 LAD1O00515 517 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 DDNO94850 711 aaPredicted RBP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 PRPF6O94906 941 aaKnown RBP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 RRAGAQ7L523 313 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 CNGA4Q8IV77 575 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 SLFN12Q8IYM2 578 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 ANKRD13CQ8N6S4 541 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 AK8Q96MA6 479 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 AS3MTQ9HBK9 375 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 SPON1Q9HCB6 807 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 RIC8AQ9NPQ8 531 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 FUT2Q10981 343 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 KRT31Q15323 416 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 XKR9Q5GH70 373 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 FAM102BQ5T8I3 360 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 SNRNP48Q6IEG0 339 aaKnown RBP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 KCNF1Q9H3M0 494 aa9.6□□□□□ -0.87
SKAP2-201ENST00000345317 RPAP3Q9H6T3 665 aaPredicted RBP9.6□□□□□ -0.87
SKAP2-201ENST00000345317 ERCC5P28715 1186 aaPredicted RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 STK4Q13043 487 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 STXBP4Q6ZWJ1 553 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 C10orf67Q8IYJ2 551 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 RMDN3Q96TC7 470 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 ASTN2O75129 1339 aaPredicted RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 EXOC3O60645 756 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 ADAM9Q13443 819 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 ODR4Q5SWX8 454 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 DLK2Q6UY11 383 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 P2RX5Q93086 422 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 TEKT3Q9BXF9 490 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 HPSEQ9Y251 543 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 SOWAHDA6NJG2 315 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 TMCO5BA8MYB1 307 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 CD44P16070 742 aaKnown RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 SSR1P43307 286 aaKnown RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 RNASE9P60153 205 aaKnown RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 SUPT20HL1Q3ZLR7 823 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 CCDC122Q5T0U0 273 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 CCDC70Q6NSX1 233 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 KRT26Q7Z3Y9 468 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 ARGLU1Q9NWB6 273 aaPredicted RBP9.59□□□□□ -0.87
SKAP2-201ENST00000345317 IMPACTQ9P2X3 320 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 RSPH14Q9UHP6 348 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 PLCH1Q4KWH8 1693 aa9.59□□□□□ -0.87
SKAP2-201ENST00000345317 A0A1W2PRG0 241 aa9.58□□□□□ -0.88
SKAP2-201ENST00000345317 GCFC2P16383 781 aaKnown RBP9.58□□□□□ -0.88
SKAP2-201ENST00000345317 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
SKAP2-201ENST00000345317 PCIF1Q9H4Z3 704 aa9.58□□□□□ -0.88
SKAP2-201ENST00000345317 VCPKMTQ9H867 229 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms