RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 A6NJR5 290 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 GOLGA8AA7E2F4 631 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 GOLGA8BA8MQT2 603 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 RCAN1P53805 252 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 PURAQ00577 322 aaKnown RBP18.53■□□□□ 0.56
ATG4B-201ENST00000344376 LY6KQ17RY6 165 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 LRIT3Q3SXY7 679 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 SLC43A3Q8NBI5 491 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 TBX21Q9UL17 535 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 LTBP2Q14767 1821 aa18.53■□□□□ 0.56
ATG4B-201ENST00000344376 PSMC6P62333 389 aa18.52■□□□□ 0.56
ATG4B-201ENST00000344376 VSIG10LQ86VR7 867 aa18.52■□□□□ 0.56
ATG4B-201ENST00000344376 BRPF3Q9ULD4 1205 aa18.52■□□□□ 0.56
ATG4B-201ENST00000344376 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.55
ATG4B-201ENST00000344376 FPGSQ05932 587 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 DDX41Q9UJV9 622 aaKnown RBP18.51■□□□□ 0.55
ATG4B-201ENST00000344376 PIK3CDO00329 1044 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 STAM2O75886 525 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 TIMP1P01033 207 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 ITGB8P26012 769 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 ARHGAP1Q07960 439 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 Q6ZUG5 572 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 IL31RAQ8NI17 732 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 AFG1LQ8WV93 481 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
ATG4B-201ENST00000344376 GRIN2DO15399 1336 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 FRMPD4Q14CM0 1322 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 CNTNAP5Q8WYK1 1306 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 hCG_1642624A0A1W2PR95 340 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 CD4P01730 458 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 MMP3P08254 477 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 CPA1P15085 419 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 CASTP20810 708 aaKnown RBP18.5■□□□□ 0.55
ATG4B-201ENST00000344376 RPS6KB1P23443 525 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.55
ATG4B-201ENST00000344376 LAMC2Q13753 1193 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 USP17L6PQ6QN14 398 aa18.5■□□□□ 0.55
ATG4B-201ENST00000344376 DHX37Q8IY37 1157 aaKnown RBP18.5■□□□□ 0.55
ATG4B-201ENST00000344376 EMID1Q96A84 441 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-201ENST00000344376 SOX1O00570 391 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-201ENST00000344376 SUPT20HL2P0C7V6 817 aa18.49■□□□□ 0.55
ATG4B-201ENST00000344376 TGFB3P10600 412 aa18.49■□□□□ 0.55
ATG4B-201ENST00000344376 FAM47CQ5HY64 1035 aa18.49■□□□□ 0.55
ATG4B-201ENST00000344376 MFSD5Q6N075 450 aa18.49■□□□□ 0.55
ATG4B-201ENST00000344376 XRRA1Q6P2D8 792 aa18.49■□□□□ 0.55
ATG4B-201ENST00000344376 BRF1Q92994 677 aa18.49■□□□□ 0.55
ATG4B-201ENST00000344376 ALDH8A1Q9H2A2 487 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-201ENST00000344376 APOBRQ0VD83 1088 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.552e-8■■□□□ 12.5
ATG4B-201ENST00000344376 DGKDQ16760 1214 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 PPTC7Q8NI37 304 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 LRCH3Q96II8 777 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 PPP1R12CQ9BZL4 782 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 HIPK3Q9H422 1215 aa18.48■□□□□ 0.55
ATG4B-201ENST00000344376 hCG_1984214I3L0E3 225 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 MEIS2O14770 477 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 B4GALT4O60513 344 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 RGS20O76081 388 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 NAPAP54920 295 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 PTPN11Q06124 597 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-201ENST00000344376 NBPF20Q3BBV1 942 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 PPP1R18Q6NYC8 613 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 NFRKBQ6P4R8 1299 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 TEX2Q8IWB9 1127 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 FBXL16Q8N461 479 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 ZNF713Q8N859 430 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-201ENST00000344376 GPKOWQ92917 476 aaPredicted RBP eCLIP18.47■□□□□ 0.553e-7■□□□□ 9.2
ATG4B-201ENST00000344376 TRPV6Q9H1D0 765 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 EHMT1Q9H9B1 1298 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 SPDYE3A6NKU9 549 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 GGPS1O95749 300 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 SHHQ15465 462 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 CELF3Q5SZQ8 465 aaKnown RBP18.47■□□□□ 0.55
ATG4B-201ENST00000344376 PCNX4Q63HM2 1172 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 GPR153Q6NV75 609 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 INPP4AQ96PE3 977 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-201ENST00000344376 USP26Q9BXU7 913 aa18.47■□□□□ 0.55
ATG4B-201ENST00000344376 V9GY48 417 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-201ENST00000344376 KIAA1217Q5T5P2 1943 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 UBA1P22314 1058 aaKnown RBP18.46■□□□□ 0.55
ATG4B-201ENST00000344376 FUT2Q10981 343 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 C9orf50Q5SZB4 431 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 WWC2Q6AWC2 1192 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 ZFP91Q96JP5 570 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-201ENST00000344376 RNPC3Q96LT9 517 aaKnown RBP18.46■□□□□ 0.55
ATG4B-201ENST00000344376 SPATA33Q96N06 139 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 KATNAL1Q9BW62 490 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 MLXIPQ9HAP2 919 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 CYP46A1Q9Y6A2 500 aa18.46■□□□□ 0.55
ATG4B-201ENST00000344376 FIBPO43427 364 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 CDC27P30260 824 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 ICAM3P32942 547 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 CYP2C18P33260 490 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 MRPS9P82933 396 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms